Resource

Id DNase-seq/ENCSR325FWMcontent_copy
Type position_score
Version 0
Summary DNase-seq ENCSR325FWM [biosample_summary="Homo sapiens adrenal gland tissue female adult (41 years)"]
Description
Labels
  • accession: ENCSR325FWM
  • assay_term_name: DNase-seq
  • biosample_ontology: /biosample-types/tissue_UBERON_0002369/
  • biosample_summary: Homo sapiens adrenal gland tissue female adult (41 years)
  • date_created: 2019-02-01T18:29:53.532580+00:00
  • date_released: 2020-09-28
  • doi: 10.17989/ENCSR325FWM
  • perturbed: False
  • reference_genome: hg38/genomes/GRCh38-hg38
  • replication_type: unreplicated
  • simple_biosample_summary: female adult (41 years)
  • status: released
  • submitter_comment:

Scores (1)

ID Type Default annotation Description Histogram Range Summary
DNase-seq_ENCSR325FWM float

DNase-seq_ENCSR325FWM

DNase-seq ENCSR325FWM [biosample_summary="Homo sapiens adrenal gland tissue female adult (41 years)"]
HISTOGRAM FOR DNase-seq_ENCSR325FWM [0.04, 45.1]
n
24,152,514
mean
2.49
sd
3.43

n counts base pairs; sd is the population standard deviation.

Coverage

Chromosome Covered positions Covered % Segments
all chromosomes 241525140.75% 131413
chr1 2283688 0.92% 12399
chr2 1790037 0.74% 9928
chr3 1411031 0.71% 7846
chr4 898249 0.47% 5016
chr5 1141405 0.63% 6355
chr6 1207094 0.71% 6688
chr7 1155950 0.73% 6371
chr8 1094071 0.75% 6060
chr9 1126524 0.81% 6092
chr10 1162471 0.87% 6347
chr11 1383444 1.02% 7348
chr12 1156417 0.87% 6291
chr13 465269 0.41% 2561
chr14 790423 0.74% 4278
chr15 795131 0.78% 4358
chr16 921913 1.02% 4939
chr17 1325287 1.59% 7000
chr18 456133 0.57% 2546
chr19 1183005 2.02% 6026
chr20 755842 1.17% 4074
chr21 342299 0.73% 1795
chr22 671863 1.32% 3596
chrX 634546 0.41% 3495
chrY 422 <0.01% 4
3342 contigs with no values (129077085 bp) 0 0.00% 0

Segment lengths

segments min max mean median
segments 131413 1 1000 183.79 180
global segment-length histogram

Files

Filename Size md5
ENCFF071WCJ.bed.gz 1.42 MB 48fd77f1e6c0ad19d2110b842cc61a76
ENCFF071WCJ.tabix.bed.gz 1.3 MB 494034e772064f59a3f13063d2e3b4bc
ENCFF071WCJ.tabix.bed.gz.tbi 447.88 KB 8e4e42a7ff6e272389bf2da34662d09a
genomic_resource.yaml 1.23 KB ded7ee081a304d13868a6bad90dddb65
statistics/