Resource

Id DNase-seq/ENCSR320TUJcontent_copy
Type position_score
Version 0
Summary DNase-seq ENCSR320TUJ [biosample_summary="Homo sapiens common myeloid progenitor, CD34-positive female adult (50 years)"]
Description
Labels
  • accession: ENCSR320TUJ
  • assay_term_name: DNase-seq
  • biosample_ontology: /biosample-types/primary_cell_CL_0001059/
  • biosample_summary: Homo sapiens common myeloid progenitor, CD34-positive female adult (50 years)
  • date_created: 2015-09-16T21:42:08.981981+00:00
  • date_released: 2013-07-31
  • doi: 10.17989/ENCSR320TUJ
  • perturbed: False
  • reference_genome: hg38/genomes/GRCh38-hg38
  • replication_type: unreplicated
  • simple_biosample_summary: female adult (50 years)
  • status: released
  • submitter_comment:

Scores (1)

ID Type Default annotation Description Histogram Range Summary
DNase-seq_ENCSR320TUJ float

DNase-seq_ENCSR320TUJ
DNase-seq ENCSR320TUJ [biosample_summary="Homo sapiens common myeloid progenitor, CD34-positive female adult (50 years)"]
 HISTOGRAM FOR DNase-seq_ENCSR320TUJ [0.196, 52.1]
n
15,168,507
mean
4.31
sd
5.54

n counts base pairs; sd is the population standard deviation.

Coverage

Chromosome Covered positions Covered % Segments
all chromosomes 151685070.47% 85192
chr1 1447494 0.58% 8111
chr2 1165627 0.48% 6578
chr3 972408 0.49% 5509
chr4 710630 0.37% 4008
chr5 752530 0.41% 4270
chr6 896482 0.52% 5028
chr7 768685 0.48% 4383
chr8 658751 0.45% 3753
chr9 612237 0.44% 3438
chr10 714214 0.53% 4057
chr11 749740 0.56% 4228
chr12 781479 0.59% 4386
chr13 384294 0.34% 2181
chr14 504225 0.47% 2812
chr15 489415 0.48% 2761
chr16 503422 0.56% 2803
chr17 709722 0.85% 3895
chr18 304446 0.38% 1750
chr19 706927 1.21% 3741
chr20 391068 0.61% 2213
chr21 172267 0.37% 954
chr22 299078 0.59% 1679
chrX 472962 0.30% 2651
chrY 404 <0.01% 3
3342 contigs with no values (129077085 bp) 0 0.00% 0

Segment lengths

segments min max mean median
segments 85192 16 780 178.05 180
global segment-length histogram

Files

Filename Size md5
ENCFF843YAB.bed.gz 916.0 KB c1b7c634af641063a999e8d0fd481273
ENCFF843YAB.tabix.bed.gz 825.42 KB 33d004761aeb12141b913de2bbee7192
ENCFF843YAB.tabix.bed.gz.tbi 405.35 KB 7c49605727712077373d658244f622c9
genomic_resource.yaml 2.12 KB 57b6198d4c51539bceb9acdabdcd2004
statistics/