Resource

Id DNase-seq/ENCSR314EZYcontent_copy
Type position_score
Version 0
Summary DNase-seq ENCSR314EZY [biosample_summary="Homo sapiens L1-S8"]
Description
Labels
  • accession: ENCSR314EZY
  • assay_term_name: DNase-seq
  • biosample_ontology: /biosample-types/cell_line_EFO_0007599/
  • biosample_summary: Homo sapiens L1-S8
  • date_created: 2016-03-31T17:53:35.161544+00:00
  • date_released: 2016-05-11
  • doi: 10.17989/ENCSR314EZY
  • perturbed: False
  • reference_genome: hg38/genomes/GRCh38-hg38
  • replication_type: isogenic
  • simple_biosample_summary:
  • status: released
  • submitter_comment:

Scores (1)

ID Type Default annotation Description Histogram Range Summary
DNase-seq_ENCSR314EZY float

DNase-seq_ENCSR314EZY
DNase-seq ENCSR314EZY [biosample_summary="Homo sapiens L1-S8"]
 HISTOGRAM FOR DNase-seq_ENCSR314EZY [2, 150]
n
36,182,030
mean
61.3
sd
31.8

n counts base pairs; sd is the population standard deviation.

Coverage

Chromosome Covered positions Covered % Segments
all chromosomes 361820301.12% 252764
chr1 3212280 1.29% 22463
chr2 3079120 1.27% 21529
chr3 2453110 1.24% 17107
chr4 1884970 0.99% 13263
chr5 2007340 1.11% 13962
chr6 2115910 1.24% 14780
chr7 1902330 1.19% 13374
chr8 1727340 1.19% 12042
chr9 1535570 1.11% 10690
chr10 1727930 1.29% 12008
chr11 1787320 1.32% 12402
chr12 1738720 1.30% 12156
chr13 1060250 0.93% 7420
chr14 1112160 1.04% 7764
chr15 1130710 1.11% 7911
chr16 1187480 1.31% 8353
chr17 1442920 1.73% 10167
chr18 925170 1.15% 6382
chr19 1074410 1.83% 7551
chr20 911560 1.41% 6293
chr21 427230 0.91% 2974
chr22 668810 1.32% 4680
chrX 1023540 0.66% 7146
chrY 45850 0.08% 347
3342 contigs with no values (129077085 bp) 0 0.00% 0

Segment lengths

segments min max mean median
segments 252764 10 390 143.15 150
global segment-length histogram

Files

Filename Size md5
ENCFF870CIR.bed.gz 2.16 MB 9bc5a01b11f4f73f17a465927f94d58b
ENCFF870CIR.tabix.bed.gz 1.97 MB e3169851d81ae9733efa30ae5b184374
ENCFF870CIR.tabix.bed.gz.tbi 718.88 KB 69f4e33ff9411538c077d2e60eed2619
genomic_resource.yaml 1.06 KB 49980c4a244191ef99d8b4db11eaca19
statistics/