Resource

Id DNase-seq/ENCSR303YIIcontent_copy
Type position_score
Version 0
Summary DNase-seq ENCSR303YII [biosample_summary="Homo sapiens muscle of arm tissue male embryo (96 days)"]
Description
Labels
  • accession: ENCSR303YII
  • assay_term_name: DNase-seq
  • biosample_ontology: /biosample-types/tissue_UBERON_0001499/
  • biosample_summary: Homo sapiens muscle of arm tissue male embryo (96 days)
  • date_created: 2015-09-16T21:42:39.263108+00:00
  • date_released: 2013-07-31
  • doi: 10.17989/ENCSR303YII
  • perturbed: False
  • reference_genome: hg38/genomes/GRCh38-hg38
  • replication_type: unreplicated
  • simple_biosample_summary: male embryo (96 days)
  • status: released
  • submitter_comment:

Scores (1)

ID Type Default annotation Description Histogram Range Summary
DNase-seq_ENCSR303YII float

DNase-seq_ENCSR303YII
DNase-seq ENCSR303YII [biosample_summary="Homo sapiens muscle of arm tissue male embryo (96 days)"]
 HISTOGRAM FOR DNase-seq_ENCSR303YII [0.212, 19.3]
n
11,576,636
mean
2.71
sd
2.33

n counts base pairs; sd is the population standard deviation.

Coverage

Chromosome Covered positions Covered % Segments
all chromosomes 115766360.36% 63597
chr1 1056780 0.42% 5739
chr2 917517 0.38% 5034
chr3 748148 0.38% 4143
chr4 590847 0.31% 3286
chr5 652410 0.36% 3585
chr6 715973 0.42% 3962
chr7 584916 0.37% 3272
chr8 549830 0.38% 3035
chr9 492217 0.36% 2684
chr10 557615 0.42% 3084
chr11 602517 0.45% 3286
chr12 578958 0.43% 3164
chr13 314967 0.28% 1748
chr14 375850 0.35% 2053
chr15 364456 0.36% 2034
chr16 361765 0.40% 1976
chr17 476327 0.57% 2565
chr18 253679 0.32% 1405
chr19 469486 0.80% 2432
chr20 289541 0.45% 1617
chr21 133255 0.29% 732
chr22 187253 0.37% 1052
chrX 293345 0.19% 1656
chrY 8984 0.02% 53
3342 contigs with no values (129077085 bp) 0 0.00% 0

Segment lengths

segments min max mean median
segments 63597 2 880 182.03 180
global segment-length histogram

Files

Filename Size md5
ENCFF066YSB.bed.gz 673.09 KB 7c599f05d349d7811c1f5bee6187e0f4
ENCFF066YSB.tabix.bed.gz 602.5 KB c0ac7ac4d77bec6e20c5a04079625030
ENCFF066YSB.tabix.bed.gz.tbi 342.4 KB 87ea3c843a6483e361e13036ccfb5cfc
genomic_resource.yaml 1.83 KB b43252ca8bc6c58fde719d522e426ccc
statistics/