Resource

Id DNase-seq/ENCSR298OIKcontent_copy
Type position_score
Version 0
Summary DNase-seq ENCSR298OIK [biosample_summary="Homo sapiens heart right ventricle tissue male adult (43 years)"]
Description
Labels
  • accession: ENCSR298OIK
  • assay_term_name: DNase-seq
  • biosample_ontology: /biosample-types/tissue_UBERON_0002080/
  • biosample_summary: Homo sapiens heart right ventricle tissue male adult (43 years)
  • date_created: 2019-09-12T18:22:18.114598+00:00
  • date_released: 2020-09-28
  • doi: 10.17989/ENCSR298OIK
  • perturbed: False
  • reference_genome: hg38/genomes/GRCh38-hg38
  • replication_type: unreplicated
  • simple_biosample_summary: male adult (43 years)
  • status: released
  • submitter_comment:

Scores (1)

ID Type Default annotation Description Histogram Range Summary
DNase-seq_ENCSR298OIK float

DNase-seq_ENCSR298OIK

DNase-seq ENCSR298OIK [biosample_summary="Homo sapiens heart right ventricle tissue male adult (43 years)"]
HISTOGRAM FOR DNase-seq_ENCSR298OIK [0.0441, 24.8]
n
18,883,535
mean
1.96
sd
2.42

n counts base pairs; sd is the population standard deviation.

Coverage

Chromosome Covered positions Covered % Segments
all chromosomes 188835350.59% 100935
chr1 1830276 0.74% 9730
chr2 1408734 0.58% 7677
chr3 1161797 0.59% 6265
chr4 734378 0.39% 4067
chr5 958230 0.53% 5185
chr6 1035286 0.61% 5588
chr7 852461 0.53% 4647
chr8 823507 0.57% 4455
chr9 842384 0.61% 4477
chr10 946230 0.71% 5065
chr11 1060959 0.79% 5595
chr12 915335 0.69% 4882
chr13 413748 0.36% 2257
chr14 587065 0.55% 3115
chr15 672972 0.66% 3614
chr16 706835 0.78% 3680
chr17 975364 1.17% 5025
chr18 372247 0.46% 2062
chr19 871265 1.49% 4326
chr20 550546 0.85% 2949
chr21 226521 0.48% 1178
chr22 428835 0.84% 2260
chrX 487507 0.31% 2715
chrY 21053 0.04% 121
3342 contigs with no values (129077085 bp) 0 0.00% 0

Segment lengths

segments min max mean median
segments 100935 2 880 187.09 180
global segment-length histogram

Files

Filename Size md5
ENCFF521JOO.bed.gz 1.09 MB f8be6b6d2cfbb4f796b07601b5becdc7
ENCFF521JOO.tabix.bed.gz 1016.34 KB 35ce86b72d95e7aa3c52547f58c0fc96
ENCFF521JOO.tabix.bed.gz.tbi 407.18 KB ff548b9cd3197ce10f27d6f1a1b1844f
genomic_resource.yaml 1.24 KB aa11030f58e63968f89cb86f012d9c7f
statistics/