Resource

Id DNase-seq/ENCSR295ELCcontent_copy
Type position_score
Version 0
Summary DNase-seq ENCSR295ELC [biosample_summary="Homo sapiens muscle of back tissue male embryo (97 days)"]
Description
Labels
  • accession: ENCSR295ELC
  • assay_term_name: DNase-seq
  • biosample_ontology: /biosample-types/tissue_UBERON_0002324/
  • biosample_summary: Homo sapiens muscle of back tissue male embryo (97 days)
  • date_created: 2015-09-16T21:42:58.014180+00:00
  • date_released: 2013-07-31
  • doi: 10.17989/ENCSR295ELC
  • perturbed: False
  • reference_genome: hg38/genomes/GRCh38-hg38
  • replication_type: unreplicated
  • simple_biosample_summary: male embryo (97 days)
  • status: released
  • submitter_comment:

Scores (1)

ID Type Default annotation Description Histogram Range Summary
DNase-seq_ENCSR295ELC float

DNase-seq_ENCSR295ELC
DNase-seq ENCSR295ELC [biosample_summary="Homo sapiens muscle of back tissue male embryo (97 days)"]
 HISTOGRAM FOR DNase-seq_ENCSR295ELC [3, 1.56e+03]
n
10,087,725
mean
38.1
sd
33

n counts base pairs; sd is the population standard deviation.

Coverage

Chromosome Covered positions Covered % Segments
all chromosomes 100877250.31% 66883
chr1 917189 0.37% 6080
chr2 828038 0.34% 5490
chr3 685674 0.35% 4535
chr4 535454 0.28% 3549
chr5 573262 0.32% 3793
chr6 624254 0.37% 4134
chr7 508606 0.32% 3371
chr8 487857 0.34% 3234
chr9 426486 0.31% 2830
chr10 488215 0.36% 3242
chr11 505124 0.37% 3351
chr12 518301 0.39% 3438
chr13 271876 0.24% 1803
chr14 322196 0.30% 2139
chr15 313454 0.31% 2073
chr16 300181 0.33% 1994
chr17 398049 0.48% 2643
chr18 233712 0.29% 1548
chr19 350880 0.60% 2329
chr20 243932 0.38% 1624
chr21 128030 0.27% 846
chr22 168097 0.33% 1115
chrX 248808 0.16% 1655
chrY 10050 0.02% 67
3342 contigs with no values (129077085 bp) 0 0.00% 0

Segment lengths

segments min max mean median
segments 66883 16 450 150.83 150
global segment-length histogram

Files

Filename Size md5
ENCFF261BTV.bed.gz 646.54 KB 143deea5cbf4721c4988dfb67921edb4
ENCFF261BTV.tabix.bed.gz 553.76 KB b461c04991dcaa68d97750941cf28261
ENCFF261BTV.tabix.bed.gz.tbi 347.84 KB 79e9704257ac3541e57a3225f8639b0b
genomic_resource.yaml 1.4 KB c28d1c96566742893270566fae4a027c
statistics/