Resource

Id DNase-seq/ENCSR265TEKcontent_copy
Type position_score
Version 0
Summary DNase-seq ENCSR265TEK [biosample_summary="Homo sapiens NCI-H226"]
Description
Labels
  • accession: ENCSR265TEK
  • assay_term_name: DNase-seq
  • biosample_ontology: /biosample-types/cell_line_EFO_0002285/
  • biosample_summary: Homo sapiens NCI-H226
  • date_created: 2015-03-22T21:31:46.588304+00:00
  • date_released: 2015-11-05
  • doi: 10.17989/ENCSR265TEK
  • perturbed: False
  • reference_genome: hg38/genomes/GRCh38-hg38
  • replication_type: isogenic
  • simple_biosample_summary:
  • status: released
  • submitter_comment:

Scores (1)

ID Type Default annotation Description Histogram Range Summary
DNase-seq_ENCSR265TEK float

DNase-seq_ENCSR265TEK

DNase-seq ENCSR265TEK [biosample_summary="Homo sapiens NCI-H226"]
HISTOGRAM FOR DNase-seq_ENCSR265TEK [0.0346, 26]
n
31,447,632
mean
1.92
sd
1.91

n counts base pairs; sd is the population standard deviation.

Coverage

Chromosome Covered positions Covered % Segments
all chromosomes 314476320.98% 165797
chr1 2964567 1.19% 15525
chr2 2545430 1.05% 13592
chr3 2126841 1.07% 11246
chr4 1696827 0.89% 9129
chr5 1933881 1.07% 10236
chr6 2011700 1.18% 10623
chr7 1766476 1.11% 9397
chr8 1548809 1.07% 8164
chr9 1308664 0.95% 6854
chr10 1276834 0.95% 6822
chr11 1606650 1.19% 8415
chr12 1683573 1.26% 8863
chr13 856005 0.75% 4576
chr14 997907 0.93% 5266
chr15 1089986 1.07% 5706
chr16 892065 0.99% 4607
chr17 1227665 1.47% 6341
chr18 654842 0.81% 3509
chr19 949943 1.62% 4730
chr20 689808 1.07% 3623
chr21 377889 0.81% 2025
chr22 398781 0.78% 2074
chrX 791042 0.51% 4191
chrY 51447 0.09% 283
3342 contigs with no values (129077085 bp) 0 0.00% 0

Segment lengths

segments min max mean median
segments 165797 4 760 189.68 193
global segment-length histogram

Files

Filename Size md5
ENCFF933CVK.bed.gz 1.8 MB a71cce48a519780698221c539815d0f7
ENCFF933CVK.tabix.bed.gz 1.63 MB 307b01997142919e8c1ddea50bdd3be7
ENCFF933CVK.tabix.bed.gz.tbi 567.08 KB 2b9545eb476530addc14719befb77617
genomic_resource.yaml 1.07 KB 1d07ce7ea59157fe390d31dae7c60014
statistics/