Resource

Id DNase-seq/ENCSR263IGUcontent_copy
Type position_score
Version 0
Summary DNase-seq ENCSR263IGU [biosample_summary="Homo sapiens right lung tissue female embryo (91 days)"]
Description
Labels
  • accession: ENCSR263IGU
  • assay_term_name: DNase-seq
  • biosample_ontology: /biosample-types/tissue_UBERON_0002167/
  • biosample_summary: Homo sapiens right lung tissue female embryo (91 days)
  • date_created: 2015-09-16T21:42:52.819205+00:00
  • date_released: 2013-07-31
  • doi: 10.17989/ENCSR263IGU
  • perturbed: False
  • reference_genome: hg38/genomes/GRCh38-hg38
  • replication_type: unreplicated
  • simple_biosample_summary: female embryo (91 days)
  • status: released
  • submitter_comment:

Scores (1)

ID Type Default annotation Description Histogram Range Summary
DNase-seq_ENCSR263IGU float

DNase-seq_ENCSR263IGU
DNase-seq ENCSR263IGU [biosample_summary="Homo sapiens right lung tissue female embryo (91 days)"]
 HISTOGRAM FOR DNase-seq_ENCSR263IGU [0.186, 20.9]
n
14,649,352
mean
3.22
sd
3.08

n counts base pairs; sd is the population standard deviation.

Coverage

Chromosome Covered positions Covered % Segments
all chromosomes 146493520.46% 74865
chr1 1330469 0.53% 6741
chr2 1185696 0.49% 6063
chr3 954830 0.48% 4862
chr4 734039 0.39% 3745
chr5 804209 0.44% 4157
chr6 893635 0.52% 4557
chr7 744581 0.47% 3823
chr8 659315 0.45% 3413
chr9 611411 0.44% 3135
chr10 717208 0.54% 3697
chr11 750460 0.56% 3813
chr12 739153 0.55% 3722
chr13 396891 0.35% 2045
chr14 458561 0.43% 2342
chr15 495615 0.49% 2534
chr16 448307 0.50% 2321
chr17 625571 0.75% 3166
chr18 328159 0.41% 1719
chr19 574993 0.98% 2772
chr20 376880 0.58% 1970
chr21 154519 0.33% 793
chr22 248047 0.49% 1295
chrX 416523 0.27% 2178
chrY 280 <0.01% 2
3342 contigs with no values (129077085 bp) 0 0.00% 0

Segment lengths

segments min max mean median
segments 74865 2 880 195.68 180
global segment-length histogram

Files

Filename Size md5
ENCFF685KAU.bed.gz 796.29 KB 2108e37efa8728a6a7e466a00782801e
ENCFF685KAU.tabix.bed.gz 720.08 KB 5f1bec90483825266765551e8880e11a
ENCFF685KAU.tabix.bed.gz.tbi 375.74 KB 2b5b40925307ed95ed7a4a470c836add
genomic_resource.yaml 1.83 KB 8222c6147cc4c856c53bc5de19bd82d9
statistics/