Resource

Id DNase-seq/ENCSR259GYPcontent_copy
Type position_score
Version 0
Summary DNase-seq ENCSR259GYP [biosample_summary="Homo sapiens adrenal gland tissue female adult (51 years)"]
Description
Labels
  • accession: ENCSR259GYP
  • assay_term_name: DNase-seq
  • biosample_ontology: /biosample-types/tissue_UBERON_0002369/
  • biosample_summary: Homo sapiens adrenal gland tissue female adult (51 years)
  • date_created: 2019-08-18T16:57:12.040069+00:00
  • date_released: 2019-11-08
  • doi: 10.17989/ENCSR259GYP
  • perturbed: False
  • reference_genome: hg38/genomes/GRCh38-hg38
  • replication_type: unreplicated
  • simple_biosample_summary: female adult (51 years)
  • status: released
  • submitter_comment:

Scores (1)

ID Type Default annotation Description Histogram Range Summary
DNase-seq_ENCSR259GYP float

DNase-seq_ENCSR259GYP
DNase-seq ENCSR259GYP [biosample_summary="Homo sapiens adrenal gland tissue female adult (51 years)"]
 HISTOGRAM FOR DNase-seq_ENCSR259GYP [5, 1.08e+05]
n
12,670,116
mean
109
sd
393

n counts base pairs; sd is the population standard deviation.

Coverage

Chromosome Covered positions Covered % Segments
all chromosomes 126701160.39% 84383
chr1 1218041 0.49% 8120
chr2 977742 0.40% 6511
chr3 787544 0.40% 5243
chr4 515862 0.27% 3434
chr5 644586 0.36% 4290
chr6 688593 0.40% 4586
chr7 626149 0.39% 4170
chr8 559097 0.39% 3724
chr9 567756 0.41% 3781
chr10 615153 0.46% 4098
chr11 674609 0.50% 4493
chr12 622102 0.47% 4145
chr13 284794 0.25% 1898
chr14 402276 0.38% 2680
chr15 428716 0.42% 2855
chr16 474170 0.52% 3159
chr17 615205 0.74% 4096
chr18 268611 0.33% 1786
chr19 561289 0.96% 3737
chr20 367607 0.57% 2450
chr21 139800 0.30% 932
chr22 282356 0.56% 1883
chrX 347458 0.22% 2308
chrY 600 <0.01% 4
3342 contigs with no values (129077085 bp) 0 0.00% 0

Segment lengths

segments min max mean median
segments 84383 18 450 150.15 150
global segment-length histogram

Files

Filename Size md5
ENCFF335CNN.bed.gz 838.06 KB d7486a9cb41617ea07233a56ffe03f09
ENCFF335CNN.tabix.bed.gz 718.31 KB 6502312be4b528829ffca042c523dd22
ENCFF335CNN.tabix.bed.gz.tbi 383.5 KB 8fe33959cbdcdc1a769dece6e11749e4
genomic_resource.yaml 1.4 KB c81cf18628f34d89fce28c3752b874e4
statistics/