Resource

Id DNase-seq/ENCSR241BNZcontent_copy
Type position_score
Version 0
Summary DNase-seq ENCSR241BNZ [biosample_summary="Homo sapiens CD14-positive monocyte male adult (30 years)"]
Description
Labels
  • accession: ENCSR241BNZ
  • assay_term_name: DNase-seq
  • biosample_ontology: /biosample-types/primary_cell_CL_0001054/
  • biosample_summary: Homo sapiens CD14-positive monocyte male adult (30 years)
  • date_created: 2019-08-24T00:09:21.906131+00:00
  • date_released: 2020-10-05
  • doi: 10.17989/ENCSR241BNZ
  • perturbed: False
  • reference_genome: hg38/genomes/GRCh38-hg38
  • replication_type: unreplicated
  • simple_biosample_summary: male adult (30 years)
  • status: released
  • submitter_comment:

Scores (1)

ID Type Default annotation Description Histogram Range Summary
DNase-seq_ENCSR241BNZ float

DNase-seq_ENCSR241BNZ
DNase-seq ENCSR241BNZ [biosample_summary="Homo sapiens CD14-positive monocyte male adult (30 years)"]
 HISTOGRAM FOR DNase-seq_ENCSR241BNZ [0.045, 32]
n
16,447,714
mean
1.83
sd
2.78

n counts base pairs; sd is the population standard deviation.

Coverage

Chromosome Covered positions Covered % Segments
all chromosomes 164477140.51% 89904
chr1 1457882 0.59% 8051
chr2 1414059 0.58% 7710
chr3 833426 0.42% 4607
chr4 582079 0.31% 3166
chr5 704350 0.39% 3898
chr6 709067 0.42% 3980
chr7 834163 0.52% 4510
chr8 763940 0.53% 4089
chr9 725444 0.52% 3906
chr10 933341 0.70% 5084
chr11 1081647 0.80% 5749
chr12 690139 0.52% 3802
chr13 257114 0.22% 1413
chr14 510772 0.48% 2814
chr15 506918 0.50% 2814
chr16 640041 0.71% 3547
chr17 946669 1.14% 5199
chr18 276954 0.34% 1499
chr19 838704 1.43% 4496
chr20 612195 0.95% 3383
chr21 244043 0.52% 1344
chr22 597334 1.18% 3246
chrX 279856 0.18% 1550
chrY 7577 0.01% 47
3342 contigs with no values (129077085 bp) 0 0.00% 0

Segment lengths

segments min max mean median
segments 89904 1 920 182.95 180
global segment-length histogram

Files

Filename Size md5
ENCFF834PXB.bed.gz 954.48 KB a6498ecbce2bb4db5012e366fb9955e5
ENCFF834PXB.tabix.bed.gz 877.62 KB 84e0a97442bfcc386ce60ddb645318dc
ENCFF834PXB.tabix.bed.gz.tbi 251.11 KB e26768d24783f97b994c34bfcae3713c
genomic_resource.yaml 2.04 KB 54c0057c35b0ef8c8d15cdb35027d436
statistics/