Resource

Id DNase-seq/ENCSR234FTXcontent_copy
Type position_score
Version 0
Summary DNase-seq ENCSR234FTX [biosample_summary="Homo sapiens CD4-positive, CD25-positive, alpha-beta regulatory T cell"]
Description
Labels
  • accession: ENCSR234FTX
  • assay_term_name: DNase-seq
  • biosample_ontology: /biosample-types/primary_cell_CL_0000792/
  • biosample_summary: Homo sapiens CD4-positive, CD25-positive, alpha-beta regulatory T cell
  • date_created: 2022-03-15T00:46:41.371395+00:00
  • date_released: 2022-05-25
  • doi: 10.17989/ENCSR234FTX
  • perturbed: False
  • reference_genome: hg38/genomes/GRCh38-hg38
  • replication_type: unreplicated
  • simple_biosample_summary:
  • status: released
  • submitter_comment:

Scores (1)

ID Type Default annotation Description Histogram Range Summary
DNase-seq_ENCSR234FTX float

DNase-seq_ENCSR234FTX
DNase-seq ENCSR234FTX [biosample_summary="Homo sapiens CD4-positive, CD25-positive, alpha-beta regulatory T cell"]
 HISTOGRAM FOR DNase-seq_ENCSR234FTX [0.0898, 69.1]
n
13,315,769
mean
5.16
sd
8.27

n counts base pairs; sd is the population standard deviation.

Coverage

Chromosome Covered positions Covered % Segments
all chromosomes 133157690.41% 66896
chr1 1320870 0.53% 6651
chr2 997120 0.41% 5008
chr3 760055 0.38% 3864
chr4 503704 0.26% 2535
chr5 631200 0.35% 3180
chr6 827059 0.48% 4058
chr7 629527 0.40% 3196
chr8 498418 0.34% 2554
chr9 525531 0.38% 2678
chr10 619849 0.46% 3100
chr11 671448 0.50% 3383
chr12 699667 0.52% 3482
chr13 317442 0.28% 1551
chr14 476282 0.44% 2397
chr15 442588 0.43% 2251
chr16 488070 0.54% 2429
chr17 731343 0.88% 3660
chr18 226735 0.28% 1149
chr19 726443 1.24% 3567
chr20 348971 0.54% 1783
chr21 154913 0.33% 786
chr22 282242 0.56% 1447
chrX 436243 0.28% 2186
chrY 49 <0.01% 1
3342 contigs with no values (129077085 bp) 0 0.00% 0

Segment lengths

segments min max mean median
segments 66896 3 1080 199.05 180
global segment-length histogram

Files

Filename Size md5
ENCFF074WON.bed.gz 746.03 KB 37bc5261258bdc6511e30d12f2b169bc
ENCFF074WON.tabix.bed.gz 684.64 KB e89a29f41733c6f502e9d478d385dc51
ENCFF074WON.tabix.bed.gz.tbi 286.19 KB 41151ead036848037b930e40fb75619b
genomic_resource.yaml 1.23 KB 9ac2ff1f939228702fba2b4bc2d54404
statistics/