Resource

Id DNase-seq/ENCSR232FAScontent_copy
Type position_score
Version 0
Summary DNase-seq ENCSR232FAS [biosample_summary="Homo sapiens effector memory CD8-positive, alpha-beta T cell male adult (33 years)"]
Description
Labels
  • accession: ENCSR232FAS
  • assay_term_name: DNase-seq
  • biosample_ontology: /biosample-types/primary_cell_CL_0000913/
  • biosample_summary: Homo sapiens effector memory CD8-positive, alpha-beta T cell male adult (33 years)
  • date_created: 2021-08-31T15:47:27.431908+00:00
  • date_released: 2021-09-10
  • doi: 10.17989/ENCSR232FAS
  • perturbed: False
  • reference_genome: hg38/genomes/GRCh38-hg38
  • replication_type: unreplicated
  • simple_biosample_summary: male adult (33 years)
  • status: released
  • submitter_comment:

Scores (1)

ID Type Default annotation Description Histogram Range Summary
DNase-seq_ENCSR232FAS float

DNase-seq_ENCSR232FAS
DNase-seq ENCSR232FAS [biosample_summary="Homo sapiens effector memory CD8-positive, alpha-beta T cell male adult (33 years)"]
 HISTOGRAM FOR DNase-seq_ENCSR232FAS [0.11, 47.5]
n
10,126,265
mean
4.29
sd
4.96

n counts base pairs; sd is the population standard deviation.

Coverage

Chromosome Covered positions Covered % Segments
all chromosomes 101262650.31% 52571
chr1 1031525 0.41% 5318
chr2 702848 0.29% 3645
chr3 551249 0.28% 2909
chr4 354117 0.19% 1834
chr5 460208 0.25% 2388
chr6 612879 0.36% 3143
chr7 457499 0.29% 2403
chr8 373054 0.26% 1953
chr9 406743 0.29% 2112
chr10 463143 0.35% 2429
chr11 519081 0.38% 2719
chr12 506909 0.38% 2614
chr13 204019 0.18% 1066
chr14 365441 0.34% 1866
chr15 324442 0.32% 1719
chr16 424577 0.47% 2227
chr17 608258 0.73% 3136
chr18 162130 0.20% 863
chr19 655597 1.12% 3292
chr20 286404 0.44% 1493
chr21 112501 0.24% 584
chr22 240692 0.47% 1263
chrX 289169 0.19% 1527
chrY 13780 0.02% 68
3342 contigs with no values (129077085 bp) 0 0.00% 0

Segment lengths

segments min max mean median
segments 52571 2 920 192.62 180
global segment-length histogram

Files

Filename Size md5
ENCFF052DSF.bed.gz 580.82 KB 7501f8e646ef81ab9d7c967831203eda
ENCFF052DSF.tabix.bed.gz 535.64 KB 2d0a70370ba4dda22adae0fefcbc4102
ENCFF052DSF.tabix.bed.gz.tbi 241.21 KB 7aa28ff90566be54c07c64df36381ff5
genomic_resource.yaml 1.31 KB dbc4d16b007289732d675ca497f8b9c5
statistics/