Resource

Id DNase-seq/ENCSR229BGGcontent_copy
Type position_score
Version 0
Summary DNase-seq ENCSR229BGG [biosample_summary="Homo sapiens memory B cell male adult (40 years)"]
Description
Labels
  • accession: ENCSR229BGG
  • assay_term_name: DNase-seq
  • biosample_ontology: /biosample-types/primary_cell_CL_0000787/
  • biosample_summary: Homo sapiens memory B cell male adult (40 years)
  • date_created: 2021-11-03T04:54:29.827368+00:00
  • date_released: 2022-01-26
  • doi: 10.17989/ENCSR229BGG
  • perturbed: False
  • reference_genome: hg38/genomes/GRCh38-hg38
  • replication_type: unreplicated
  • simple_biosample_summary: male adult (40 years)
  • status: released
  • submitter_comment:

Scores (1)

ID Type Default annotation Description Histogram Range Summary
DNase-seq_ENCSR229BGG float

DNase-seq_ENCSR229BGG
DNase-seq ENCSR229BGG [biosample_summary="Homo sapiens memory B cell male adult (40 years)"]
 HISTOGRAM FOR DNase-seq_ENCSR229BGG [0.0784, 20.1]
n
11,400,592
mean
2.21
sd
2.19

n counts base pairs; sd is the population standard deviation.

Coverage

Chromosome Covered positions Covered % Segments
all chromosomes 114005920.35% 55381
chr1 1111262 0.45% 5354
chr2 835258 0.34% 4097
chr3 659142 0.33% 3239
chr4 430974 0.23% 2116
chr5 539404 0.30% 2624
chr6 722993 0.42% 3474
chr7 572482 0.36% 2797
chr8 458258 0.32% 2257
chr9 445309 0.32% 2184
chr10 512670 0.38% 2499
chr11 568854 0.42% 2750
chr12 607558 0.46% 2909
chr13 233211 0.20% 1136
chr14 392560 0.37% 1912
chr15 363068 0.36% 1783
chr16 429722 0.48% 2129
chr17 626337 0.75% 3001
chr18 203128 0.25% 990
chr19 655475 1.12% 3075
chr20 308743 0.48% 1533
chr21 127649 0.27% 621
chr22 263249 0.52% 1278
chrX 319414 0.20% 1563
chrY 13872 0.02% 60
3342 contigs with no values (129077085 bp) 0 0.00% 0

Segment lengths

segments min max mean median
segments 55381 3 1020 205.86 200
global segment-length histogram

Files

Filename Size md5
ENCFF370BCZ.bed.gz 604.68 KB 3dd44de298825b8b0e3e1679239ec6b2
ENCFF370BCZ.tabix.bed.gz 557.13 KB 58bb965b0abf0be5c3eddf34371ba4fa
ENCFF370BCZ.tabix.bed.gz.tbi 264.46 KB 94e52b1df9df7daf29e1d1a51d85c340
genomic_resource.yaml 2.01 KB 362f7276a5bbb5aad6dfb99b79fec80c
statistics/