Resource

Id DNase-seq/ENCSR222CLCcontent_copy
Type position_score
Version 0
Summary DNase-seq ENCSR222CLC [biosample_summary="Homo sapiens heart left ventricle tissue male adult (69 years)"]
Description
Labels
  • accession: ENCSR222CLC
  • assay_term_name: DNase-seq
  • biosample_ontology: /biosample-types/tissue_UBERON_0002084/
  • biosample_summary: Homo sapiens heart left ventricle tissue male adult (69 years)
  • date_created: 2019-09-12T18:22:18.204107+00:00
  • date_released: 2020-09-28
  • doi: 10.17989/ENCSR222CLC
  • perturbed: False
  • reference_genome: hg38/genomes/GRCh38-hg38
  • replication_type: unreplicated
  • simple_biosample_summary: male adult (69 years)
  • status: released
  • submitter_comment:

Scores (1)

ID Type Default annotation Description Histogram Range Summary
DNase-seq_ENCSR222CLC float

DNase-seq_ENCSR222CLC

DNase-seq ENCSR222CLC [biosample_summary="Homo sapiens heart left ventricle tissue male adult (69 years)"]
HISTOGRAM FOR DNase-seq_ENCSR222CLC [0.045, 27.2]
n
19,380,271
mean
2.04
sd
2.89

n counts base pairs; sd is the population standard deviation.

Coverage

Chromosome Covered positions Covered % Segments
all chromosomes 193802710.60% 100734
chr1 1808821 0.73% 9386
chr2 1547740 0.64% 8083
chr3 1120222 0.56% 5875
chr4 679831 0.36% 3622
chr5 966779 0.53% 5057
chr6 943906 0.55% 4986
chr7 895859 0.56% 4795
chr8 862393 0.59% 4519
chr9 868589 0.63% 4513
chr10 1021176 0.76% 5281
chr11 1082306 0.80% 5554
chr12 865549 0.65% 4461
chr13 396697 0.35% 2073
chr14 645308 0.60% 3354
chr15 707855 0.69% 3693
chr16 740392 0.82% 3874
chr17 1014134 1.22% 5166
chr18 389209 0.48% 2037
chr19 952957 1.63% 4695
chr20 597357 0.93% 3114
chr21 276140 0.59% 1393
chr22 525756 1.03% 2684
chrX 456099 0.29% 2439
chrY 15196 0.03% 80
3342 contigs with no values (129077085 bp) 0 0.00% 0

Segment lengths

segments min max mean median
segments 100734 1 1040 192.39 180
global segment-length histogram

Files

Filename Size md5
ENCFF555FXA.bed.gz 1.08 MB a54d933840c4e442f5417db9b8008ace
ENCFF555FXA.tabix.bed.gz 1010.62 KB 3721606ca82fb6749d4ae83ce2898e64
ENCFF555FXA.tabix.bed.gz.tbi 348.43 KB 2dd1bf3022a0eb89a77b5106d6650808
genomic_resource.yaml 1.24 KB 21097dc024eb8a2fd2d289ae6c2347c1
statistics/