Resource
| Id | DNase-seq/ENCSR193LYA |
|---|---|
| Type | position_score |
| Version | 0 |
| Summary | DNase-seq ENCSR193LYA [biosample_summary="Homo sapiens muscle of back tissue female embryo (85 days)"] |
| Description |
status: released biological_replicates: Rep 1 summary: female embryo (85 days) output_type: peaks audit_internal_action: Archived analysis {ENCAN348NAI|/analyses/ENCAN348NAI/} has in progress subobject quality standard {encode3-dnase|/quality-standards/encode3-dnase/} |
| Labels |
|
Scores (1)
| ID | Type | Default annotation | Description | Histogram | Range | Summary |
|---|---|---|---|---|---|---|
| DNase-seq_ENCSR193LYA | float |
DNase-seq_ENCSR193LYA |
DNase-seq ENCSR193LYA [biosample_summary="Homo sapiens muscle of back tissue female embryo (85 days)"]
|
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[2, 1.93e+03] |
|
n counts base pairs; sd is the population standard deviation.
Coverage
| Chromosome | Covered positions | Covered % | Segments |
|---|---|---|---|
| all chromosomes | 17348488 | 0.54% | 115340 |
| chr1 | 1539594 | 0.62% | 10233 |
| chr2 | 1409761 | 0.58% | 9377 |
| chr3 | 1152758 | 0.58% | 7663 |
| chr4 | 955598 | 0.50% | 6351 |
| chr5 | 1004885 | 0.55% | 6674 |
| chr6 | 1059193 | 0.62% | 7047 |
| chr7 | 897509 | 0.56% | 5956 |
| chr8 | 842960 | 0.58% | 5603 |
| chr9 | 725609 | 0.52% | 4828 |
| chr10 | 869980 | 0.65% | 5786 |
| chr11 | 860176 | 0.64% | 5723 |
| chr12 | 819615 | 0.61% | 5449 |
| chr13 | 508215 | 0.44% | 3378 |
| chr14 | 565506 | 0.53% | 3762 |
| chr15 | 537829 | 0.53% | 3582 |
| chr16 | 525485 | 0.58% | 3498 |
| chr17 | 654227 | 0.79% | 4352 |
| chr18 | 425796 | 0.53% | 2827 |
| chr19 | 516730 | 0.88% | 3440 |
| chr20 | 443238 | 0.69% | 2939 |
| chr21 | 210818 | 0.45% | 1399 |
| chr22 | 281791 | 0.55% | 1875 |
| chrX | 540015 | 0.35% | 3590 |
| chrY | 1200 | <0.01% | 8 |
| 3342 contigs with no values (129077085 bp) | 0 | 0.00% | 0 |
Segment lengths
| segments | min | max | mean | median | |
|---|---|---|---|---|---|
| segments | 115340 | 16 | 450 | 150.41 | 150 |
Files
| Filename | Size | md5 |
|---|---|---|
| ENCFF284MUO.bed.gz | 1.09 MB | 4015a72fcb9eb0e2348f7874d0f7b9e9 |
| ENCFF284MUO.tabix.bed.gz | 959.49 KB | 5bdb10950d45fbf1acbc3a1587d1a216 |
| ENCFF284MUO.tabix.bed.gz.tbi | 507.18 KB | 03bc65e65261b32fa250479c5ae2c725 |
| genomic_resource.yaml | 1.41 KB | 57c4311be1ef5dae9b3b2786f9dfd21f |
| statistics/ |
