Resource

Id DNase-seq/ENCSR191EIIcontent_copy
Type position_score
Version 0
Summary DNase-seq ENCSR191EII [biosample_summary="Homo sapiens common myeloid progenitor, CD34-positive female"]
Description
Labels
  • accession: ENCSR191EII
  • assay_term_name: DNase-seq
  • biosample_ontology: /biosample-types/primary_cell_CL_0001059/
  • biosample_summary: Homo sapiens common myeloid progenitor, CD34-positive female
  • date_created: 2015-09-16T21:42:08.485658+00:00
  • date_released: 2013-07-31
  • doi: 10.17989/ENCSR191EII
  • perturbed: False
  • reference_genome: hg38/genomes/GRCh38-hg38
  • replication_type: unreplicated
  • simple_biosample_summary: female
  • status: released
  • submitter_comment:

Scores (1)

ID Type Default annotation Description Histogram Range Summary
DNase-seq_ENCSR191EII float

DNase-seq_ENCSR191EII

DNase-seq ENCSR191EII [biosample_summary="Homo sapiens common myeloid progenitor, CD34-positive female"]
HISTOGRAM FOR DNase-seq_ENCSR191EII [0.0298, 61.4]
n
37,221,074
mean
2.28
sd
4.46

n counts base pairs; sd is the population standard deviation.

Coverage

Chromosome Covered positions Covered % Segments
all chromosomes 372210741.16% 199889
chr1 3481984 1.40% 18735
chr2 2939411 1.21% 15897
chr3 2458856 1.24% 13266
chr4 1819976 0.96% 9768
chr5 1960652 1.08% 10582
chr6 2249586 1.32% 12028
chr7 1912840 1.20% 10349
chr8 1679659 1.16% 8991
chr9 1511835 1.09% 8128
chr10 1804267 1.35% 9685
chr11 1781458 1.32% 9543
chr12 1854497 1.39% 9935
chr13 1026082 0.90% 5506
chr14 1194588 1.12% 6403
chr15 1197770 1.17% 6490
chr16 1161140 1.29% 6237
chr17 1624242 1.95% 8640
chr18 815148 1.01% 4404
chr19 1389405 2.37% 7262
chr20 969505 1.50% 5221
chr21 476507 1.02% 2538
chr22 713367 1.40% 3810
chrX 1197006 0.77% 6461
chrY 1293 <0.01% 10
3342 contigs with no values (129077085 bp) 0 0.00% 0

Segment lengths

segments min max mean median
segments 199889 3 876 186.21 180
global segment-length histogram

Files

Filename Size md5
ENCFF620JAI.bed.gz 2.15 MB 160efb97e71590357da4ad54fcee5495
ENCFF620JAI.tabix.bed.gz 1.96 MB d7a4d56ee82c819995d8d9c903b3d9fe
ENCFF620JAI.tabix.bed.gz.tbi 611.46 KB 71ad5e831048a4a5c9fdb7d4988ce4a9
genomic_resource.yaml 1.21 KB 7307660b152ff1b0727435d1e5771693
statistics/