Resource

Id DNase-seq/ENCSR184TUEcontent_copy
Type position_score
Version 0
Summary DNase-seq ENCSR184TUE [biosample_summary="Homo sapiens naive B cell"]
Description
Labels
  • accession: ENCSR184TUE
  • assay_term_name: DNase-seq
  • biosample_ontology: /biosample-types/primary_cell_CL_0000788/
  • biosample_summary: Homo sapiens naive B cell
  • date_created: 2022-01-25T19:12:18.073595+00:00
  • date_released: 2022-02-25
  • doi: 10.17989/ENCSR184TUE
  • perturbed: False
  • reference_genome: hg38/genomes/GRCh38-hg38
  • replication_type: unreplicated
  • simple_biosample_summary:
  • status: released
  • submitter_comment:

Scores (1)

ID Type Default annotation Description Histogram Range Summary
DNase-seq_ENCSR184TUE float

DNase-seq_ENCSR184TUE

DNase-seq ENCSR184TUE [biosample_summary="Homo sapiens naive B cell"]
HISTOGRAM FOR DNase-seq_ENCSR184TUE [0.09, 17.6]
n
13,522,879
mean
1.98
sd
1.83

n counts base pairs; sd is the population standard deviation.

Coverage

Chromosome Covered positions Covered % Segments
all chromosomes 135228790.42% 60256
chr1 1299703 0.52% 5709
chr2 992443 0.41% 4418
chr3 783576 0.40% 3523
chr4 518776 0.27% 2354
chr5 655269 0.36% 2878
chr6 866981 0.51% 3758
chr7 674138 0.42% 3031
chr8 548941 0.38% 2459
chr9 548696 0.40% 2511
chr10 605290 0.45% 2704
chr11 673531 0.50% 2982
chr12 715337 0.54% 3152
chr13 300105 0.26% 1326
chr14 461749 0.43% 2037
chr15 429531 0.42% 1978
chr16 503633 0.56% 2314
chr17 766777 0.92% 3337
chr18 248221 0.31% 1099
chr19 735905 1.26% 3276
chr20 349309 0.54% 1603
chr21 146547 0.31% 668
chr22 306820 0.60% 1382
chrX 391481 0.25% 1756
chrY 120 <0.01% 1
3342 contigs with no values (129077085 bp) 0 0.00% 0

Segment lengths

segments min max mean median
segments 60256 4 1060 224.42 200
global segment-length histogram

Files

Filename Size md5
ENCFF214BTG.bed.gz 644.12 KB 9bfa2b239e0409d131caf24b04e92034
ENCFF214BTG.tabix.bed.gz 601.18 KB 8f3e7c9e52558942e5c27813ffc6fc1c
ENCFF214BTG.tabix.bed.gz.tbi 266.93 KB 0011399b4375e6c00368deec49241454
genomic_resource.yaml 1.93 KB 1f339950df4ef5857fdb6742043b33e9
statistics/