Resource

Id	DNase-seq/ENCSR163GMCcontent_copy
Type	position_score
Version	0
Summary	DNase-seq ENCSR163GMC [biosample_summary="Homo sapiens with Cognitive impairment, Alzheimer''s disease; head of caudate nucleus tissue male adult (84 years)"]
Description
Labels	accession: ENCSR163GMC assay_term_name: DNase-seq biosample_ontology: /biosample-types/tissue_UBERON_0002626/ biosample_summary: Homo sapiens with Cognitive impairment, Alzheimer's disease; head of caudate nucleus tissue male adult (84 years) date_created: 2020-05-28T00:56:22.718405+00:00 date_released: 2020-09-28 doi: 10.17989/ENCSR163GMC perturbed: False reference_genome: hg38/genomes/GRCh38-hg38 replication_type: unreplicated simple_biosample_summary: male adult (84 years) with Cognitive impairment, Alzheimer's disease status: released submitter_comment:

Scores (1)

ID	Type	Default annotation	Description	Histogram	Range	Summary
DNase-seq_ENCSR163GMC	float	DNase-seq_ENCSR163GMC	DNase-seq ENCSR163GMC [biosample_summary="Homo sapiens with Cognitive impairment, Alzheimer''s disease; head of caudate nucleus tissue male adult (84 years)"]		[0.134, 35.7]	n 9,709,173 mean 3.29 sd 3.27

n counts base pairs; sd is the population standard deviation.

Chromosome	Covered positions	Covered %	Segments
all chromosomes	9709173	0.30%	55011
chr1	959477	0.39%	5406
chr2	699899	0.29%	4010
chr3	547533	0.28%	3125
chr4	365821	0.19%	2086
chr5	469441	0.26%	2718
chr6	512492	0.30%	2920
chr7	461042	0.29%	2659
chr8	382457	0.26%	2207
chr9	420127	0.30%	2371
chr10	456174	0.34%	2615
chr11	555856	0.41%	3124
chr12	478040	0.36%	2699
chr13	201418	0.18%	1165
chr14	313340	0.29%	1780
chr15	314180	0.31%	1778
chr16	409845	0.45%	2295
chr17	528986	0.64%	2948
chr18	168436	0.21%	1000
chr19	578376	0.99%	3046
chr20	285557	0.44%	1655
chr21	104877	0.22%	605
chr22	234371	0.46%	1312
chrX	252176	0.16%	1430
chrY	9252	0.02%	57
3342 contigs with no values (129077085 bp)	0	0.00%	0

	segments	min	max	mean	median
segments	55011	9	740	176.5	180