Resource

Id DNase-seq/ENCSR154ZNQcontent_copy
Type position_score
Version 0
Summary DNase-seq ENCSR154ZNQ [biosample_summary="Homo sapiens heart tissue female embryo (105 days)"]
Description
Labels
  • accession: ENCSR154ZNQ
  • assay_term_name: DNase-seq
  • biosample_ontology: /biosample-types/tissue_UBERON_0000948/
  • biosample_summary: Homo sapiens heart tissue female embryo (105 days)
  • date_created: 2015-09-16T21:42:25.761529+00:00
  • date_released: 2013-07-31
  • doi: 10.17989/ENCSR154ZNQ
  • perturbed: False
  • reference_genome: hg38/genomes/GRCh38-hg38
  • replication_type: unreplicated
  • simple_biosample_summary: female embryo (105 days)
  • status: released
  • submitter_comment:

Scores (1)

ID Type Default annotation Description Histogram Range Summary
DNase-seq_ENCSR154ZNQ float

DNase-seq_ENCSR154ZNQ
DNase-seq ENCSR154ZNQ [biosample_summary="Homo sapiens heart tissue female embryo (105 days)"]
 HISTOGRAM FOR DNase-seq_ENCSR154ZNQ [2, 4.88e+03]
n
24,189,531
mean
112
sd
150

n counts base pairs; sd is the population standard deviation.

Coverage

Chromosome Covered positions Covered % Segments
all chromosomes 241895310.75% 161013
chr1 2247946 0.90% 14969
chr2 1959773 0.81% 13045
chr3 1608030 0.81% 10701
chr4 1270358 0.67% 8444
chr5 1399466 0.77% 9315
chr6 1441399 0.84% 9604
chr7 1257923 0.79% 8372
chr8 1124763 0.77% 7483
chr9 995561 0.72% 6626
chr10 1199400 0.90% 7983
chr11 1238009 0.92% 8241
chr12 1157927 0.87% 7704
chr13 699656 0.61% 4655
chr14 738654 0.69% 4914
chr15 807952 0.79% 5381
chr16 735994 0.81% 4903
chr17 964172 1.16% 6420
chr18 576219 0.72% 3837
chr19 754882 1.29% 5026
chr20 589908 0.92% 3929
chr21 272250 0.58% 1812
chr22 436500 0.86% 2910
chrX 712039 0.46% 4734
chrY 750 <0.01% 5
3342 contigs with no values (129077085 bp) 0 0.00% 0

Segment lengths

segments min max mean median
segments 161013 16 412 150.23 150
global segment-length histogram

Files

Filename Size md5
ENCFF532OGD.bed.gz 1.53 MB 34800f0f2206d53186b4d69d0fae5fd6
ENCFF532OGD.tabix.bed.gz 1.32 MB e6b469926d01c8152727676ec3c51703
ENCFF532OGD.tabix.bed.gz.tbi 606.73 KB 035a1cab8d8143f3f22d7b8abaf3d4ad
genomic_resource.yaml 1.39 KB 613e8a4ffb75b17b25f685131afcb69e
statistics/