Resource
| Id | DNase-seq/ENCSR153LHP |
|---|---|
| Type | position_score |
| Version | 0 |
| Summary | DNase-seq ENCSR153LHP [biosample_summary="Homo sapiens foreskin fibroblast male newborn"] |
| Description |
status: released biological_replicates: Rep 1 summary: male newborn output_type: peaks |
| Labels |
|
Scores (1)
| ID | Type | Default annotation | Description | Histogram | Range | Summary |
|---|---|---|---|---|---|---|
| DNase-seq_ENCSR153LHP | float |
DNase-seq_ENCSR153LHP |
DNase-seq ENCSR153LHP [biosample_summary="Homo sapiens foreskin fibroblast male newborn"]
|
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[0.0197, 27.7] |
|
n counts base pairs; sd is the population standard deviation.
Coverage
| Chromosome | Covered positions | Covered % | Segments |
|---|---|---|---|
| all chromosomes | 56991953 | 1.77% | 305356 |
| chr1 | 5247292 | 2.11% | 28184 |
| chr2 | 4739712 | 1.96% | 25400 |
| chr3 | 3866676 | 1.95% | 20799 |
| chr4 | 3039851 | 1.60% | 16429 |
| chr5 | 3399165 | 1.87% | 18250 |
| chr6 | 3622975 | 2.12% | 19315 |
| chr7 | 2874778 | 1.80% | 15471 |
| chr8 | 2757101 | 1.90% | 14824 |
| chr9 | 2473289 | 1.79% | 13240 |
| chr10 | 2690012 | 2.01% | 14430 |
| chr11 | 2775651 | 2.05% | 14798 |
| chr12 | 2887295 | 2.17% | 15403 |
| chr13 | 1621342 | 1.42% | 8702 |
| chr14 | 1708493 | 1.60% | 9166 |
| chr15 | 1814459 | 1.78% | 9654 |
| chr16 | 1645124 | 1.82% | 8753 |
| chr17 | 2268859 | 2.73% | 12000 |
| chr18 | 1316578 | 1.64% | 7140 |
| chr19 | 1633289 | 2.79% | 8495 |
| chr20 | 1401363 | 2.17% | 7500 |
| chr21 | 629402 | 1.35% | 3394 |
| chr22 | 892828 | 1.76% | 4788 |
| chrX | 1621000 | 1.04% | 8855 |
| chrY | 65419 | 0.11% | 366 |
| 3342 contigs with no values (129077085 bp) | 0 | 0.00% | 0 |
Segment lengths
| segments | min | max | mean | median | |
|---|---|---|---|---|---|
| segments | 305356 | 2 | 960 | 186.64 | 180 |
Files
| Filename | Size | md5 |
|---|---|---|
| ENCFF119TMJ.bed.gz | 3.3 MB | 0fc55545f9de8c3899af3125abc28782 |
| ENCFF119TMJ.tabix.bed.gz | 3.02 MB | 80bb12e9b3889861bfef83e836227dc1 |
| ENCFF119TMJ.tabix.bed.gz.tbi | 717.3 KB | dcc7cec303d0663c46f9b779235a9ce6 |
| genomic_resource.yaml | 1.17 KB | b2b7a561dc79914da84508a92cd7119d |
| statistics/ |
