Resource

Id DNase-seq/ENCSR129BZEcontent_copy
Type position_score
Version 0
Summary DNase-seq ENCSR129BZE [biosample_summary="Homo sapiens uterus tissue female adult (53 years)"]
Description
Labels
  • accession: ENCSR129BZE
  • assay_term_name: DNase-seq
  • biosample_ontology: /biosample-types/tissue_UBERON_0000995/
  • biosample_summary: Homo sapiens uterus tissue female adult (53 years)
  • date_created: 2019-08-18T16:57:12.273217+00:00
  • date_released: 2019-11-08
  • doi: 10.17989/ENCSR129BZE
  • perturbed: False
  • reference_genome: hg38/genomes/GRCh38-hg38
  • replication_type: unreplicated
  • simple_biosample_summary: female adult (53 years)
  • status: released
  • submitter_comment:

Scores (1)

ID Type Default annotation Description Histogram Range Summary
DNase-seq_ENCSR129BZE float

DNase-seq_ENCSR129BZE

DNase-seq ENCSR129BZE [biosample_summary="Homo sapiens uterus tissue female adult (53 years)"]
HISTOGRAM FOR DNase-seq_ENCSR129BZE [0.0537, 53.3]
n
19,175,353
mean
2.6
sd
4.12

n counts base pairs; sd is the population standard deviation.

Coverage

Chromosome Covered positions Covered % Segments
all chromosomes 191753530.60% 99354
chr1 1838659 0.74% 9528
chr2 1574147 0.65% 8135
chr3 1092198 0.55% 5754
chr4 662953 0.35% 3481
chr5 862352 0.48% 4555
chr6 955494 0.56% 5058
chr7 861980 0.54% 4564
chr8 790655 0.54% 4145
chr9 940879 0.68% 4841
chr10 1018308 0.76% 5283
chr11 1179436 0.87% 5961
chr12 888420 0.67% 4624
chr13 381910 0.33% 2020
chr14 664808 0.62% 3447
chr15 700276 0.69% 3597
chr16 655022 0.73% 3394
chr17 1047853 1.26% 5298
chr18 370934 0.46% 1988
chr19 878319 1.50% 4347
chr20 555940 0.86% 2873
chr21 285772 0.61% 1420
chr22 499292 0.98% 2527
chrX 469370 0.30% 2511
chrY 376 <0.01% 3
3342 contigs with no values (129077085 bp) 0 0.00% 0

Segment lengths

segments min max mean median
segments 99354 1 1000 193 180
global segment-length histogram

Files

Filename Size md5
ENCFF661ERT.bed.gz 1.07 MB cdcd9fb1a194dd4301e29457c4c4eaa2
ENCFF661ERT.tabix.bed.gz 1002.25 KB fe1a0b3c6aab6a30f8ac8e7cee020729
ENCFF661ERT.tabix.bed.gz.tbi 323.65 KB de4e5ed854f4dce5dab0ab7d0217c54e
genomic_resource.yaml 1.21 KB 5f55b4bd45c8199ef7fc9c6258b566a6
statistics/