Resource
| Id | DNase-seq/ENCSR121ZSL |
|---|---|
| Type | position_score |
| Version | 0 |
| Summary | DNase-seq ENCSR121ZSL [biosample_summary="Homo sapiens trophoblast cell embryo (21 weeks)"] |
| Description |
status: released biological_replicates: Rep 1 summary: embryo (21 weeks) output_type: peaks |
| Labels |
|
Scores (1)
| ID | Type | Default annotation | Description | Histogram | Range | Summary |
|---|---|---|---|---|---|---|
| DNase-seq_ENCSR121ZSL | float |
DNase-seq_ENCSR121ZSL |
DNase-seq ENCSR121ZSL [biosample_summary="Homo sapiens trophoblast cell embryo (21 weeks)"]
|
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[0.0107, 11.6] |
|
n counts base pairs; sd is the population standard deviation.
Coverage
| Chromosome | Covered positions | Covered % | Segments |
|---|---|---|---|
| all chromosomes | 72185581 | 2.24% | 356784 |
| chr1 | 6652161 | 2.67% | 32809 |
| chr2 | 5936436 | 2.45% | 29322 |
| chr3 | 4884177 | 2.46% | 24134 |
| chr4 | 3851550 | 2.02% | 19148 |
| chr5 | 4156836 | 2.29% | 20503 |
| chr6 | 4572408 | 2.68% | 22465 |
| chr7 | 3797331 | 2.38% | 18757 |
| chr8 | 3343639 | 2.30% | 16528 |
| chr9 | 3049865 | 2.20% | 15097 |
| chr10 | 3361526 | 2.51% | 16682 |
| chr11 | 3474161 | 2.57% | 17165 |
| chr12 | 3528661 | 2.65% | 17406 |
| chr13 | 2042468 | 1.79% | 10050 |
| chr14 | 2201332 | 2.06% | 10850 |
| chr15 | 2293350 | 2.25% | 11349 |
| chr16 | 2050521 | 2.27% | 10202 |
| chr17 | 2823635 | 3.39% | 13997 |
| chr18 | 1618246 | 2.01% | 8040 |
| chr19 | 2342289 | 4.00% | 11415 |
| chr20 | 1740598 | 2.70% | 8686 |
| chr21 | 898146 | 1.92% | 4395 |
| chr22 | 1244097 | 2.45% | 6157 |
| chrX | 2319544 | 1.49% | 11607 |
| chrY | 2604 | <0.01% | 20 |
| 3342 contigs with no values (129077085 bp) | 0 | 0.00% | 0 |
Segment lengths
| segments | min | max | mean | median | |
|---|---|---|---|---|---|
| segments | 356784 | 1 | 1120 | 202.32 | 200 |
Files
| Filename | Size | md5 |
|---|---|---|
| ENCFF440FUZ.bed.gz | 3.74 MB | 850ac94bba9d7ce28cbb610a15a65a5c |
| ENCFF440FUZ.tabix.bed.gz | 3.48 MB | 11b585f954b80bcda62b25e56035cadd |
| ENCFF440FUZ.tabix.bed.gz.tbi | 789.2 KB | 0f521499d271b4fca27d64ce6eedc552 |
| genomic_resource.yaml | 1.19 KB | a5312cf980d059a71958f56f13dcb60f |
| statistics/ |
