Resource

Id DNase-seq/ENCSR064GBKcontent_copy
Type position_score
Version 0
Summary DNase-seq ENCSR064GBK [biosample_summary="Homo sapiens heart tissue female embryo (91 days)"]
Description
Labels
  • accession: ENCSR064GBK
  • assay_term_name: DNase-seq
  • biosample_ontology: /biosample-types/tissue_UBERON_0000948/
  • biosample_summary: Homo sapiens heart tissue female embryo (91 days)
  • date_created: 2015-09-16T21:42:25.572083+00:00
  • date_released: 2013-07-31
  • doi: 10.17989/ENCSR064GBK
  • perturbed: False
  • reference_genome: hg38/genomes/GRCh38-hg38
  • replication_type: unreplicated
  • simple_biosample_summary: female embryo (91 days)
  • status: released
  • submitter_comment:

Scores (1)

ID Type Default annotation Description Histogram Range Summary
DNase-seq_ENCSR064GBK float

DNase-seq_ENCSR064GBK
DNase-seq ENCSR064GBK [biosample_summary="Homo sapiens heart tissue female embryo (91 days)"]
 HISTOGRAM FOR DNase-seq_ENCSR064GBK [0.194, 21.9]
n
14,592,149
mean
3.14
sd
2.81

n counts base pairs; sd is the population standard deviation.

Coverage

Chromosome Covered positions Covered % Segments
all chromosomes 145921490.45% 77846
chr1 1383694 0.56% 7346
chr2 1129183 0.47% 6123
chr3 988768 0.50% 5296
chr4 756136 0.40% 4033
chr5 808925 0.45% 4351
chr6 883397 0.52% 4714
chr7 757210 0.48% 4043
chr8 648127 0.45% 3460
chr9 620158 0.45% 3297
chr10 720293 0.54% 3851
chr11 738316 0.55% 3935
chr12 732084 0.55% 3855
chr13 393077 0.34% 2124
chr14 435109 0.41% 2311
chr15 493242 0.48% 2630
chr16 452756 0.50% 2432
chr17 603312 0.72% 3184
chr18 341147 0.42% 1823
chr19 565497 0.96% 2840
chr20 349951 0.54% 1895
chr21 161438 0.35% 859
chr22 255036 0.50% 1374
chrX 375153 0.24% 2069
chrY 140 <0.01% 1
3342 contigs with no values (129077085 bp) 0 0.00% 0

Segment lengths

segments min max mean median
segments 77846 2 820 187.45 180
global segment-length histogram

Files

Filename Size md5
ENCFF302OBA.bed.gz 831.39 KB d7bdbf45afc2d16bb3fbb50de1e64e4c
ENCFF302OBA.tabix.bed.gz 745.46 KB e7d998da60f60b29a21b4d640ccb0c92
ENCFF302OBA.tabix.bed.gz.tbi 390.78 KB b53dd174809933db110144ccc8bd9e31
genomic_resource.yaml 1.82 KB 5864cd4fb695f9d7776893aef3941ab7
statistics/