Resource

Id DNase-seq/ENCSR033STLcontent_copy
Type position_score
Version 0
Summary DNase-seq ENCSR033STL [biosample_summary="Homo sapiens muscle of back tissue female embryo (105 days)"]
Description
Labels
  • accession: ENCSR033STL
  • assay_term_name: DNase-seq
  • biosample_ontology: /biosample-types/tissue_UBERON_0002324/
  • biosample_summary: Homo sapiens muscle of back tissue female embryo (105 days)
  • date_created: 2015-09-16T21:42:58.501921+00:00
  • date_released: 2013-07-31
  • doi: 10.17989/ENCSR033STL
  • perturbed: False
  • reference_genome: hg38/genomes/GRCh38-hg38
  • replication_type: unreplicated
  • simple_biosample_summary: female embryo (105 days)
  • status: released
  • submitter_comment:

Scores (1)

ID Type Default annotation Description Histogram Range Summary
DNase-seq_ENCSR033STL float

DNase-seq_ENCSR033STL

DNase-seq ENCSR033STL [biosample_summary="Homo sapiens muscle of back tissue female embryo (105 days)"]
HISTOGRAM FOR DNase-seq_ENCSR033STL [0.102, 22]
n
23,453,396
mean
2.02
sd
2.52

n counts base pairs; sd is the population standard deviation.

Coverage

Chromosome Covered positions Covered % Segments
all chromosomes 234533960.73% 118644
chr1 2089720 0.84% 10495
chr2 1893774 0.78% 9613
chr3 1543967 0.78% 7868
chr4 1232294 0.65% 6202
chr5 1336183 0.74% 6704
chr6 1474605 0.86% 7387
chr7 1207834 0.76% 6167
chr8 1124178 0.77% 5682
chr9 1010990 0.73% 5113
chr10 1152867 0.86% 5845
chr11 1163814 0.86% 5857
chr12 1155116 0.87% 5795
chr13 679699 0.59% 3492
chr14 751983 0.70% 3743
chr15 766978 0.75% 3855
chr16 703069 0.78% 3618
chr17 926526 1.11% 4685
chr18 544351 0.68% 2788
chr19 774842 1.32% 3785
chr20 572360 0.89% 2964
chr21 272846 0.58% 1390
chr22 370341 0.73% 1922
chrX 704501 0.45% 3670
chrY 558 <0.01% 4
3342 contigs with no values (129077085 bp) 0 0.00% 0

Segment lengths

segments min max mean median
segments 118644 1 1100 197.68 186
global segment-length histogram

Files

Filename Size md5
ENCFF778EZA.bed.gz 1.24 MB 84eb253e3a9812fafb7ae874e58c2e51
ENCFF778EZA.tabix.bed.gz 1.13 MB 4c73c43fdbde6f078262bf45146ebe19
ENCFF778EZA.tabix.bed.gz.tbi 492.81 KB a17f9893320742a827dca2b566ba0c1e
genomic_resource.yaml 1.24 KB 6242f237eea8893f57104227d0a590dc
statistics/