Resource

Id DNase-seq/ENCSR026EOMcontent_copy
Type position_score
Version 0
Summary DNase-seq ENCSR026EOM [biosample_summary="Homo sapiens brain tissue female embryo (85 days)"]
Description
Labels
  • accession: ENCSR026EOM
  • assay_term_name: DNase-seq
  • biosample_ontology: /biosample-types/tissue_UBERON_0000955/
  • biosample_summary: Homo sapiens brain tissue female embryo (85 days)
  • date_created: 2015-09-16T21:42:27.806887+00:00
  • date_released: 2013-07-31
  • doi: 10.17989/ENCSR026EOM
  • perturbed: False
  • reference_genome: hg38/genomes/GRCh38-hg38
  • replication_type: unreplicated
  • simple_biosample_summary: female embryo (85 days)
  • status: released
  • submitter_comment:

Scores (1)

ID Type Default annotation Description Histogram Range Summary
DNase-seq_ENCSR026EOM float

DNase-seq_ENCSR026EOM
DNase-seq ENCSR026EOM [biosample_summary="Homo sapiens brain tissue female embryo (85 days)"]
 HISTOGRAM FOR DNase-seq_ENCSR026EOM [3, 3.23e+03]
n
19,451,926
mean
65
sd
80.8

n counts base pairs; sd is the population standard deviation.

Coverage

Chromosome Covered positions Covered % Segments
all chromosomes 194519260.60% 129349
chr1 1674878 0.67% 11144
chr2 1618668 0.67% 10766
chr3 1329935 0.67% 8844
chr4 1125706 0.59% 7484
chr5 1197005 0.66% 7948
chr6 1209426 0.71% 8043
chr7 1039532 0.65% 6906
chr8 943209 0.65% 6280
chr9 799528 0.58% 5320
chr10 911296 0.68% 6055
chr11 961376 0.71% 6392
chr12 941486 0.71% 6267
chr13 603166 0.53% 4001
chr14 627443 0.59% 4168
chr15 596056 0.58% 3967
chr16 592559 0.66% 3939
chr17 690092 0.83% 4596
chr18 480776 0.60% 3201
chr19 510481 0.87% 3399
chr20 482807 0.75% 3213
chr21 224005 0.48% 1491
chr22 297545 0.59% 1978
chrX 590901 0.38% 3920
chrY 4050 0.01% 27
3342 contigs with no values (129077085 bp) 0 0.00% 0

Segment lengths

segments min max mean median
segments 129349 16 441 150.38 150
global segment-length histogram

Files

Filename Size md5
ENCFF322ZNH.bed.gz 1.22 MB a39eb761ad63a5799bf151a0656586f5
ENCFF322ZNH.tabix.bed.gz 1.05 MB 1a59040a8b34295add4bc27452fff1a9
ENCFF322ZNH.tabix.bed.gz.tbi 558.47 KB 20b6d5810fefc7cda4276d66725c8cdc
genomic_resource.yaml 1.38 KB 664ccd8d6557c3805298b1d5eac35417
statistics/