Resource

Id DNase-seq/ENCSR025BWHcontent_copy
Type position_score
Version 0
Summary DNase-seq ENCSR025BWH [biosample_summary="Homo sapiens CD8-positive, alpha-beta memory T cell male adult (24 years)"]
Description
Labels
  • accession: ENCSR025BWH
  • assay_term_name: DNase-seq
  • biosample_ontology: /biosample-types/primary_cell_CL_0000909/
  • biosample_summary: Homo sapiens CD8-positive, alpha-beta memory T cell male adult (24 years)
  • date_created: 2020-05-11T17:33:09.092881+00:00
  • date_released: 2020-10-05
  • doi: 10.17989/ENCSR025BWH
  • perturbed: False
  • reference_genome: hg38/genomes/GRCh38-hg38
  • replication_type: unreplicated
  • simple_biosample_summary: male adult (24 years)
  • status: released
  • submitter_comment:

Scores (1)

ID Type Default annotation Description Histogram Range Summary
DNase-seq_ENCSR025BWH float

DNase-seq_ENCSR025BWH
DNase-seq ENCSR025BWH [biosample_summary="Homo sapiens CD8-positive, alpha-beta memory T cell male adult (24 years)"]
 HISTOGRAM FOR DNase-seq_ENCSR025BWH [0.12, 92.6]
n
9,615,973
mean
7.32
sd
9.71

n counts base pairs; sd is the population standard deviation.

Coverage

Chromosome Covered positions Covered % Segments
all chromosomes 96159730.30% 49245
chr1 995526 0.40% 5102
chr2 659848 0.27% 3428
chr3 496560 0.25% 2534
chr4 316330 0.17% 1620
chr5 423803 0.23% 2188
chr6 555329 0.33% 2833
chr7 432748 0.27% 2221
chr8 339854 0.23% 1759
chr9 389592 0.28% 2003
chr10 418673 0.31% 2163
chr11 495647 0.37% 2530
chr12 484254 0.36% 2473
chr13 175098 0.15% 890
chr14 342526 0.32% 1742
chr15 307578 0.30% 1606
chr16 407383 0.45% 2069
chr17 602691 0.72% 3058
chr18 143325 0.18% 749
chr19 703676 1.20% 3481
chr20 272965 0.42% 1420
chr21 106802 0.23% 551
chr22 237655 0.47% 1224
chrX 296310 0.19% 1542
chrY 11800 0.02% 59
3342 contigs with no values (129077085 bp) 0 0.00% 0

Segment lengths

segments min max mean median
segments 49245 5 800 195.27 180
global segment-length histogram

Files

Filename Size md5
ENCFF224KBE.bed.gz 558.05 KB 5e114949505c65d8640631d19db9b7da
ENCFF224KBE.tabix.bed.gz 510.9 KB cbc60117c7a76e699f0fc1fa50008f78
ENCFF224KBE.tabix.bed.gz.tbi 220.67 KB 443ad8cc50f527bdbccabc4573be3d42
genomic_resource.yaml 1.28 KB 5bd24f1701577ae1b078df2b51563287
statistics/