Resource

Id DNase-seq/ENCSR010ZMKcontent_copy
Type position_score
Version 0
Summary DNase-seq ENCSR010ZMK [biosample_summary="Homo sapiens muscle of back tissue female embryo (113 days)"]
Description
Labels
  • accession: ENCSR010ZMK
  • assay_term_name: DNase-seq
  • biosample_ontology: /biosample-types/tissue_UBERON_0002324/
  • biosample_summary: Homo sapiens muscle of back tissue female embryo (113 days)
  • date_created: 2015-09-16T21:42:57.608492+00:00
  • date_released: 2013-07-31
  • doi: 10.17989/ENCSR010ZMK
  • perturbed: False
  • reference_genome: hg38/genomes/GRCh38-hg38
  • replication_type: unreplicated
  • simple_biosample_summary: female embryo (113 days)
  • status: released
  • submitter_comment:

Scores (1)

ID Type Default annotation Description Histogram Range Summary
DNase-seq_ENCSR010ZMK float

DNase-seq_ENCSR010ZMK

DNase-seq ENCSR010ZMK [biosample_summary="Homo sapiens muscle of back tissue female embryo (113 days)"]
HISTOGRAM FOR DNase-seq_ENCSR010ZMK [0.173, 22.1]
n
12,570,384
mean
2.81
sd
2.77

n counts base pairs; sd is the population standard deviation.

Coverage

Chromosome Covered positions Covered % Segments
all chromosomes 125703840.39% 67878
chr1 1139924 0.46% 6090
chr2 1004726 0.41% 5493
chr3 819284 0.41% 4447
chr4 639943 0.34% 3477
chr5 700541 0.39% 3814
chr6 784948 0.46% 4232
chr7 628941 0.39% 3418
chr8 594224 0.41% 3222
chr9 530553 0.38% 2842
chr10 588769 0.44% 3202
chr11 635347 0.47% 3430
chr12 625474 0.47% 3365
chr13 344856 0.30% 1886
chr14 415482 0.39% 2218
chr15 403101 0.40% 2191
chr16 389578 0.43% 2102
chr17 521383 0.63% 2815
chr18 278151 0.35% 1518
chr19 496966 0.85% 2482
chr20 307061 0.48% 1684
chr21 142297 0.30% 763
chr22 212767 0.42% 1158
chrX 365908 0.23% 2028
chrY 160 <0.01% 1
3342 contigs with no values (129077085 bp) 0 0.00% 0

Segment lengths

segments min max mean median
segments 67878 1 900 185.19 180
global segment-length histogram

Files

Filename Size md5
ENCFF746PGG.bed.gz 720.01 KB eb19ac364de8abe5aa497c7d6a28e7fc
ENCFF746PGG.tabix.bed.gz 643.69 KB 986b9e02fee84ec260d9eb0e091c91b3
ENCFF746PGG.tabix.bed.gz.tbi 355.67 KB b7b2a13fa03a4121535c7483a1af4faa
genomic_resource.yaml 1.85 KB 4c2dc75a136b9f69085dbe9667c4ad21
statistics/