Resource
| Id | DNase-seq/ENCSR000EQL |
|---|---|
| Type | position_score |
| Version | 0 |
| Summary | DNase-seq ENCSR000EQL [biosample_summary="Homo sapiens WERI-Rb-1"] |
| Description |
status: released biological_replicates: Rep 2 summary: output_type: peaks audit_internal_action: Archived analysis {ENCAN990SLK|/analyses/ENCAN990SLK/} has in progress subobject quality standard {encode3-dnase|/quality-standards/encode3-dnase/} |
| Labels |
|
Scores (1)
| ID | Type | Default annotation | Description | Histogram | Range | Summary |
|---|---|---|---|---|---|---|
| DNase-seq_ENCSR000EQL | float |
DNase-seq_ENCSR000EQL |
DNase-seq ENCSR000EQL [biosample_summary="Homo sapiens WERI-Rb-1"]
|
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[3, 3.42e+03] |
|
n counts base pairs; sd is the population standard deviation.
Coverage
| Chromosome | Covered positions | Covered % | Segments |
|---|---|---|---|
| all chromosomes | 20027521 | 0.62% | 133321 |
| chr1 | 1932039 | 0.78% | 12870 |
| chr2 | 1691745 | 0.70% | 11268 |
| chr3 | 1330907 | 0.67% | 8853 |
| chr4 | 1245306 | 0.65% | 8287 |
| chr5 | 1191089 | 0.66% | 7927 |
| chr6 | 1276841 | 0.75% | 8494 |
| chr7 | 1038293 | 0.65% | 6904 |
| chr8 | 971046 | 0.67% | 6466 |
| chr9 | 905331 | 0.65% | 6025 |
| chr10 | 864332 | 0.65% | 5750 |
| chr11 | 976635 | 0.72% | 6504 |
| chr12 | 962357 | 0.72% | 6408 |
| chr13 | 582432 | 0.51% | 3876 |
| chr14 | 617461 | 0.58% | 4111 |
| chr15 | 599464 | 0.59% | 3991 |
| chr16 | 586018 | 0.65% | 3905 |
| chr17 | 798593 | 0.96% | 5322 |
| chr18 | 518340 | 0.64% | 3450 |
| chr19 | 482250 | 0.82% | 3213 |
| chr20 | 435600 | 0.68% | 2898 |
| chr21 | 220800 | 0.47% | 1469 |
| chr22 | 307640 | 0.61% | 2046 |
| chrX | 490002 | 0.31% | 3264 |
| chrY | 3000 | 0.01% | 20 |
| 3342 contigs with no values (129077085 bp) | 0 | 0.00% | 0 |
Segment lengths
| segments | min | max | mean | median | |
|---|---|---|---|---|---|
| segments | 133321 | 20 | 450 | 150.22 | 150 |
Files
| Filename | Size | md5 |
|---|---|---|
| ENCFF362PAJ.bed.gz | 1.26 MB | d4fa751b3a247a854656092727648c55 |
| ENCFF362PAJ.tabix.bed.gz | 1.09 MB | 770e14e2ac994cef12831a894e69a390 |
| ENCFF362PAJ.tabix.bed.gz.tbi | 578.93 KB | 3f656da8c52b1fb638d33fa447ae6219 |
| genomic_resource.yaml | 1.26 KB | 3725ee4b7fa6a3b56d29368e6e8e3fb5 |
| statistics/ |
