Resource
| Id | DNase-seq/ENCSR000EQD |
|---|---|
| Type | position_score |
| Version | 0 |
| Summary | DNase-seq ENCSR000EQD [biosample_summary="Homo sapiens T-helper 1 cell female adult (26 years)"] |
| Description |
status: released biological_replicates: Rep 1 summary: female adult (26 years) output_type: peaks |
| Labels |
|
Scores (1)
| ID | Type | Default annotation | Description | Histogram | Range | Summary |
|---|---|---|---|---|---|---|
| DNase-seq_ENCSR000EQD | float |
DNase-seq_ENCSR000EQD |
DNase-seq ENCSR000EQD [biosample_summary="Homo sapiens T-helper 1 cell female adult (26 years)"]
|
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[0.0302, 67.9] |
|
n counts base pairs; sd is the population standard deviation.
Coverage
| Chromosome | Covered positions | Covered % | Segments |
|---|---|---|---|
| all chromosomes | 21055731 | 0.65% | 103646 |
| chr1 | 2013212 | 0.81% | 9927 |
| chr2 | 1684722 | 0.70% | 8240 |
| chr3 | 1344472 | 0.68% | 6599 |
| chr4 | 898155 | 0.47% | 4466 |
| chr5 | 1065671 | 0.59% | 5217 |
| chr6 | 1351806 | 0.79% | 6533 |
| chr7 | 991741 | 0.62% | 4936 |
| chr8 | 909839 | 0.63% | 4506 |
| chr9 | 845405 | 0.61% | 4208 |
| chr10 | 1016232 | 0.76% | 4983 |
| chr11 | 994293 | 0.74% | 4966 |
| chr12 | 1066755 | 0.80% | 5258 |
| chr13 | 494325 | 0.43% | 2435 |
| chr14 | 748127 | 0.70% | 3641 |
| chr15 | 703048 | 0.69% | 3469 |
| chr16 | 734330 | 0.81% | 3597 |
| chr17 | 1038971 | 1.25% | 5071 |
| chr18 | 386261 | 0.48% | 1913 |
| chr19 | 870272 | 1.48% | 4209 |
| chr20 | 548367 | 0.85% | 2744 |
| chr21 | 243046 | 0.52% | 1214 |
| chr22 | 411813 | 0.81% | 2027 |
| chrX | 694069 | 0.44% | 3481 |
| chrY | 799 | <0.01% | 6 |
| 3342 contigs with no values (129077085 bp) | 0 | 0.00% | 0 |
Segment lengths
| segments | min | max | mean | median | |
|---|---|---|---|---|---|
| segments | 103646 | 3 | 1000 | 203.15 | 200 |
Files
| Filename | Size | md5 |
|---|---|---|
| ENCFF830KSX.bed.gz | 1.13 MB | 275f7fdc7b48e9282fd4178585348c5d |
| ENCFF830KSX.tabix.bed.gz | 1.04 MB | e8b0cf06e09b624d3536b117472861ce |
| ENCFF830KSX.tabix.bed.gz.tbi | 389.4 KB | 5c8e4d515ef1119e73e23f6a2630261d |
| genomic_resource.yaml | 1.22 KB | e81c328ba46bc376fc6ed719faa87332 |
| statistics/ |
