Resource

Id DNase-seq/ENCSR000EOTcontent_copy
Type position_score
Version 0
Summary DNase-seq ENCSR000EOT [biosample_summary="Homo sapiens K562"]
Description
Labels
  • accession: ENCSR000EOT
  • assay_term_name: DNase-seq
  • biosample_ontology: /biosample-types/cell_line_EFO_0002067/
  • biosample_summary: Homo sapiens K562
  • date_created: 2014-01-09T19:40:36.471171+00:00
  • date_released: 2018-05-09
  • doi: 10.17989/ENCSR000EOT
  • perturbed: False
  • reference_genome: hg38/genomes/GRCh38-hg38
  • replication_type: isogenic
  • simple_biosample_summary:
  • status: released
  • submitter_comment:

Scores (1)

ID Type Default annotation Description Histogram Range Summary
DNase-seq_ENCSR000EOT float

DNase-seq_ENCSR000EOT
DNase-seq ENCSR000EOT [biosample_summary="Homo sapiens K562"]
 HISTOGRAM FOR DNase-seq_ENCSR000EOT [0.0332, 120]
n
29,784,607
mean
2.31
sd
3.61

n counts base pairs; sd is the population standard deviation.

Coverage

Chromosome Covered positions Covered % Segments
all chromosomes 297846070.93% 159764
chr1 3095645 1.24% 16479
chr2 2174520 0.90% 11777
chr3 1811902 0.91% 9808
chr4 1247776 0.66% 6884
chr5 1453343 0.80% 7899
chr6 1903097 1.11% 10118
chr7 1593774 1.00% 8572
chr8 1226564 0.85% 6690
chr9 1148860 0.83% 6153
chr10 1329266 0.99% 7192
chr11 1559196 1.15% 8299
chr12 1501005 1.13% 8048
chr13 609034 0.53% 3344
chr14 845737 0.79% 4585
chr15 969284 0.95% 5191
chr16 1120585 1.24% 5883
chr17 1447486 1.74% 7569
chr18 537820 0.67% 2957
chr19 1469913 2.51% 7488
chr20 792212 1.23% 4332
chr21 366642 0.78% 1972
chr22 651804 1.28% 3467
chrX 928235 0.59% 5050
chrY 907 <0.01% 7
3342 contigs with no values (129077085 bp) 0 0.00% 0

Segment lengths

segments min max mean median
segments 159764 1 1040 186.43 180
global segment-length histogram

Files

Filename Size md5
ENCFF185XRG.bed.gz 1.74 MB 04653af177917b3dda96b9454fd8f90e
ENCFF185XRG.tabix.bed.gz 1.58 MB 9cd7e2fd1cd9a34426e04266cbdbf327
ENCFF185XRG.tabix.bed.gz.tbi 514.94 KB 4ef0b59e49482d6ffd85910e9a17cba7
genomic_resource.yaml 1.69 KB 5e9b753dec12e10ea691ae65c8ee64f2
statistics/