Resource

Id DNase-seq/ENCSR000EOPcontent_copy
Type position_score
Version 0
Summary DNase-seq ENCSR000EOP [biosample_summary="Homo sapiens myotube originated from skeletal muscle myoblast"]
Description
Labels
  • accession: ENCSR000EOP
  • assay_term_name: DNase-seq
  • biosample_ontology: /biosample-types/in_vitro_differentiated_cells_CL_0002372/
  • biosample_summary: Homo sapiens myotube originated from skeletal muscle myoblast
  • date_created: 2013-09-15T21:49:43.957630-08:00
  • date_released: 2011-10-19
  • doi: 10.17989/ENCSR000EOP
  • perturbed: False
  • reference_genome: hg38/genomes/GRCh38-hg38
  • replication_type: isogenic
  • simple_biosample_summary:
  • status: released
  • submitter_comment:

Scores (1)

ID Type Default annotation Description Histogram Range Summary
DNase-seq_ENCSR000EOP float

DNase-seq_ENCSR000EOP

DNase-seq ENCSR000EOP [biosample_summary="Homo sapiens myotube originated from skeletal muscle myoblast"]
HISTOGRAM FOR DNase-seq_ENCSR000EOP [0.286, 12.5]
n
7,997,610
mean
2.62
sd
1.59

n counts base pairs; sd is the population standard deviation.

Coverage

Chromosome Covered positions Covered % Segments
all chromosomes 79976100.25% 43316
chr1 744574 0.30% 4008
chr2 680563 0.28% 3710
chr3 541445 0.27% 2948
chr4 423947 0.22% 2304
chr5 480380 0.26% 2590
chr6 509389 0.30% 2741
chr7 404301 0.25% 2234
chr8 358443 0.25% 1963
chr9 342588 0.25% 1847
chr10 386379 0.29% 2105
chr11 407815 0.30% 2170
chr12 396156 0.30% 2146
chr13 206718 0.18% 1141
chr14 237857 0.22% 1290
chr15 254418 0.25% 1393
chr16 236451 0.26% 1292
chr17 300780 0.36% 1624
chr18 175972 0.22% 971
chr19 310227 0.53% 1566
chr20 194935 0.30% 1055
chr21 97099 0.21% 508
chr22 135260 0.27% 715
chrX 164110 0.11% 942
chrY 7803 0.01% 53
3342 contigs with no values (129077085 bp) 0 0.00% 0

Segment lengths

segments min max mean median
segments 43316 2 800 184.63 180
global segment-length histogram

Files

Filename Size md5
ENCFF211XOC.bed.gz 463.19 KB 1252b4de6aff94d75cdffbe02b558bb0
ENCFF211XOC.tabix.bed.gz 404.5 KB d90defd0fd32b470e3d561e53fbd4ada
ENCFF211XOC.tabix.bed.gz.tbi 269.45 KB 8cc58beb531f5f3615f4c65d484f08cd
genomic_resource.yaml 2.57 KB 849a3dd92ee664f3ff109423d768c1b1
statistics/