Resource
| Id | DNase-seq/ENCSR000EOM |
|---|---|
| Type | position_score |
| Version | 0 |
| Summary | DNase-seq ENCSR000EOM [biosample_summary="Homo sapiens glomerular endothelial cell"] |
| Description |
status: released biological_replicates: Rep 2 summary: output_type: peaks audit_internal_action: Archived analysis {ENCAN785PMW|/analyses/ENCAN785PMW/} has in progress subobject quality standard {encode3-dnase|/quality-standards/encode3-dnase/} |
| Labels |
|
Scores (1)
| ID | Type | Default annotation | Description | Histogram | Range | Summary |
|---|---|---|---|---|---|---|
| DNase-seq_ENCSR000EOM | float |
DNase-seq_ENCSR000EOM |
DNase-seq ENCSR000EOM [biosample_summary="Homo sapiens glomerular endothelial cell"]
|
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[3, 958] |
|
n counts base pairs; sd is the population standard deviation.
Coverage
| Chromosome | Covered positions | Covered % | Segments |
|---|---|---|---|
| all chromosomes | 9892216 | 0.31% | 65768 |
| chr1 | 919742 | 0.37% | 6115 |
| chr2 | 800447 | 0.33% | 5324 |
| chr3 | 684080 | 0.34% | 4544 |
| chr4 | 557899 | 0.29% | 3712 |
| chr5 | 575348 | 0.32% | 3826 |
| chr6 | 646682 | 0.38% | 4301 |
| chr7 | 516369 | 0.32% | 3436 |
| chr8 | 454361 | 0.31% | 3018 |
| chr9 | 400336 | 0.29% | 2660 |
| chr10 | 465555 | 0.35% | 3094 |
| chr11 | 488557 | 0.36% | 3252 |
| chr12 | 515447 | 0.39% | 3429 |
| chr13 | 293676 | 0.26% | 1951 |
| chr14 | 311081 | 0.29% | 2068 |
| chr15 | 312363 | 0.31% | 2074 |
| chr16 | 275360 | 0.30% | 1831 |
| chr17 | 367896 | 0.44% | 2446 |
| chr18 | 234871 | 0.29% | 1559 |
| chr19 | 303294 | 0.52% | 2021 |
| chr20 | 230250 | 0.36% | 1531 |
| chr21 | 117375 | 0.25% | 777 |
| chr22 | 146519 | 0.29% | 973 |
| chrX | 272908 | 0.17% | 1814 |
| chrY | 1800 | <0.01% | 12 |
| 3342 contigs with no values (129077085 bp) | 0 | 0.00% | 0 |
Segment lengths
| segments | min | max | mean | median | |
|---|---|---|---|---|---|
| segments | 65768 | 35 | 336 | 150.41 | 150 |
Files
| Filename | Size | md5 |
|---|---|---|
| ENCFF927KUT.bed.gz | 638.83 KB | c84ad6fbea6905be95b16b2bba0468b5 |
| ENCFF927KUT.tabix.bed.gz | 548.6 KB | 6ba915b512754bb7c39afc9f253b3585 |
| ENCFF927KUT.tabix.bed.gz.tbi | 355.66 KB | 7ed1b2e3ba80a359383751cd049c494d |
| genomic_resource.yaml | 1.32 KB | 8e3db2d55582486250e37f21dbb79470 |
| statistics/ |
