Resource
| Id | DNase-seq/ENCSR000EOG |
|---|---|
| Type | position_score |
| Version | 0 |
| Summary | DNase-seq ENCSR000EOG [biosample_summary="Homo sapiens pulmonary artery endothelial cell female"] |
| Description |
status: released biological_replicates: Rep 1 summary: female output_type: peaks audit_internal_action: Archived analysis {ENCAN643JEA|/analyses/ENCAN643JEA/} has in progress subobject quality standard {encode3-dnase|/quality-standards/encode3-dnase/} |
| Labels |
|
Scores (1)
| ID | Type | Default annotation | Description | Histogram | Range | Summary |
|---|---|---|---|---|---|---|
| DNase-seq_ENCSR000EOG | float |
DNase-seq_ENCSR000EOG |
DNase-seq ENCSR000EOG [biosample_summary="Homo sapiens pulmonary artery endothelial cell female"]
|
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[4, 2.18e+03] |
|
n counts base pairs; sd is the population standard deviation.
Coverage
| Chromosome | Covered positions | Covered % | Segments |
|---|---|---|---|
| all chromosomes | 11327649 | 0.35% | 75439 |
| chr1 | 1058367 | 0.43% | 7049 |
| chr2 | 890550 | 0.37% | 5931 |
| chr3 | 776550 | 0.39% | 5174 |
| chr4 | 573437 | 0.30% | 3810 |
| chr5 | 645341 | 0.36% | 4300 |
| chr6 | 706588 | 0.41% | 4704 |
| chr7 | 570967 | 0.36% | 3805 |
| chr8 | 524463 | 0.36% | 3494 |
| chr9 | 465746 | 0.34% | 3103 |
| chr10 | 521250 | 0.39% | 3470 |
| chr11 | 557681 | 0.41% | 3717 |
| chr12 | 613157 | 0.46% | 4081 |
| chr13 | 305850 | 0.27% | 2036 |
| chr14 | 361650 | 0.34% | 2409 |
| chr15 | 379500 | 0.37% | 2526 |
| chr16 | 354702 | 0.39% | 2365 |
| chr17 | 465300 | 0.56% | 3098 |
| chr18 | 241950 | 0.30% | 1613 |
| chr19 | 378450 | 0.65% | 2520 |
| chr20 | 290700 | 0.45% | 1937 |
| chr21 | 126150 | 0.27% | 839 |
| chr22 | 194100 | 0.38% | 1293 |
| chrX | 321900 | 0.21% | 2143 |
| chrY | 3300 | 0.01% | 22 |
| 3342 contigs with no values (129077085 bp) | 0 | 0.00% | 0 |
Segment lengths
| segments | min | max | mean | median | |
|---|---|---|---|---|---|
| segments | 75439 | 67 | 450 | 150.16 | 150 |
Files
| Filename | Size | md5 |
|---|---|---|
| ENCFF897JBO.bed.gz | 731.27 KB | feb33f8f8e40de0eedfb3c1bf90009ea |
| ENCFF897JBO.tabix.bed.gz | 631.82 KB | c34a52e8ba0c764a6f1e2d76cf138bef |
| ENCFF897JBO.tabix.bed.gz.tbi | 376.76 KB | 4afd4140eb97e457b6096bc4cfff90f0 |
| genomic_resource.yaml | 1.36 KB | b20fd9ae18e515dca79404d349dbf353 |
| statistics/ |
