Resource

Id DNase-seq/ENCSR000EOGcontent_copy
Type position_score
Version 0
Summary DNase-seq ENCSR000EOG [biosample_summary="Homo sapiens pulmonary artery endothelial cell female"]
Description
Labels
  • accession: ENCSR000EOG
  • assay_term_name: DNase-seq
  • biosample_ontology: /biosample-types/primary_cell_CL_1001568/
  • biosample_summary: Homo sapiens pulmonary artery endothelial cell female
  • date_created: 2013-09-13T16:02:28.894492-08:00
  • date_released: 2011-10-19
  • doi: 10.17989/ENCSR000EOG
  • perturbed: False
  • reference_genome: hg38/genomes/GRCh38-hg38
  • replication_type: unreplicated
  • simple_biosample_summary: female
  • status: released
  • submitter_comment:

Scores (1)

ID Type Default annotation Description Histogram Range Summary
DNase-seq_ENCSR000EOG float

DNase-seq_ENCSR000EOG

DNase-seq ENCSR000EOG [biosample_summary="Homo sapiens pulmonary artery endothelial cell female"]
HISTOGRAM FOR DNase-seq_ENCSR000EOG [4, 2.18e+03]
n
11,327,649
mean
57.6
sd
58.8

n counts base pairs; sd is the population standard deviation.

Coverage

Chromosome Covered positions Covered % Segments
all chromosomes 113276490.35% 75439
chr1 1058367 0.43% 7049
chr2 890550 0.37% 5931
chr3 776550 0.39% 5174
chr4 573437 0.30% 3810
chr5 645341 0.36% 4300
chr6 706588 0.41% 4704
chr7 570967 0.36% 3805
chr8 524463 0.36% 3494
chr9 465746 0.34% 3103
chr10 521250 0.39% 3470
chr11 557681 0.41% 3717
chr12 613157 0.46% 4081
chr13 305850 0.27% 2036
chr14 361650 0.34% 2409
chr15 379500 0.37% 2526
chr16 354702 0.39% 2365
chr17 465300 0.56% 3098
chr18 241950 0.30% 1613
chr19 378450 0.65% 2520
chr20 290700 0.45% 1937
chr21 126150 0.27% 839
chr22 194100 0.38% 1293
chrX 321900 0.21% 2143
chrY 3300 0.01% 22
3342 contigs with no values (129077085 bp) 0 0.00% 0

Segment lengths

segments min max mean median
segments 75439 67 450 150.16 150
global segment-length histogram

Files

Filename Size md5
ENCFF897JBO.bed.gz 731.27 KB feb33f8f8e40de0eedfb3c1bf90009ea
ENCFF897JBO.tabix.bed.gz 631.82 KB c34a52e8ba0c764a6f1e2d76cf138bef
ENCFF897JBO.tabix.bed.gz.tbi 376.76 KB 4afd4140eb97e457b6096bc4cfff90f0
genomic_resource.yaml 1.36 KB b20fd9ae18e515dca79404d349dbf353
statistics/