Resource

Id DNase-seq/ENCSR000EOBcontent_copy
Type position_score
Version 0
Summary DNase-seq ENCSR000EOB [biosample_summary="Homo sapiens dermis microvascular lymphatic vessel endothelial cell male"]
Description
Labels
  • accession: ENCSR000EOB
  • assay_term_name: DNase-seq
  • biosample_ontology: /biosample-types/primary_cell_CL_2000041/
  • biosample_summary: Homo sapiens dermis microvascular lymphatic vessel endothelial cell male
  • date_created: 2013-12-12T07:09:07.786138+00:00
  • date_released: 2010-12-16
  • doi: 10.17989/ENCSR000EOB
  • perturbed: False
  • reference_genome: hg38/genomes/GRCh38-hg38
  • replication_type: isogenic
  • simple_biosample_summary: male
  • status: released
  • submitter_comment:

Scores (1)

ID Type Default annotation Description Histogram Range Summary
DNase-seq_ENCSR000EOB float

DNase-seq_ENCSR000EOB
DNase-seq ENCSR000EOB [biosample_summary="Homo sapiens dermis microvascular lymphatic vessel endothelial cell male"]
 HISTOGRAM FOR DNase-seq_ENCSR000EOB [0.0348, 44.2]
n
35,842,414
mean
2.11
sd
3.48

n counts base pairs; sd is the population standard deviation.

Coverage

Chromosome Covered positions Covered % Segments
all chromosomes 358424141.11% 187301
chr1 3284624 1.32% 17206
chr2 2834583 1.17% 14851
chr3 2392976 1.21% 12482
chr4 1773943 0.93% 9345
chr5 2034184 1.12% 10643
chr6 2241813 1.31% 11680
chr7 1844551 1.16% 9718
chr8 1644980 1.13% 8553
chr9 1521546 1.10% 7945
chr10 1714435 1.28% 8947
chr11 1737345 1.29% 9008
chr12 1813271 1.36% 9529
chr13 983687 0.86% 5191
chr14 1112578 1.04% 5798
chr15 1247724 1.22% 6424
chr16 1120131 1.24% 5843
chr17 1500047 1.80% 7800
chr18 785734 0.98% 4129
chr19 1167053 1.99% 6020
chr20 935329 1.45% 4845
chr21 390373 0.84% 2020
chr22 651974 1.28% 3386
chrX 1065530 0.68% 5698
chrY 44003 0.08% 240
3342 contigs with no values (129077085 bp) 0 0.00% 0

Segment lengths

segments min max mean median
segments 187301 3 855 191.36 180
global segment-length histogram

Files

Filename Size md5
ENCFF809MYW.bed.gz 2.03 MB a7599caa9a29e0b55841e44acac42153
ENCFF809MYW.tabix.bed.gz 1.86 MB 3274b3b2510f1f2d0b5f6e1809e6768a
ENCFF809MYW.tabix.bed.gz.tbi 555.28 KB 454b98659396678f7146a7ffd2ed75d2
genomic_resource.yaml 1.85 KB 19f9eae97dbaece2a68cd69dcb9d473d
statistics/