Resource

Id DNase-seq/ENCSR000ELIcontent_copy
Type position_score
Version 0
Summary DNase-seq ENCSR000ELI [biosample_summary="Homo sapiens C803"]
Description
Labels
  • accession: ENCSR000ELI
  • assay_term_name: DNase-seq
  • biosample_ontology: /biosample-types/cell_line_EFO_0009495/
  • biosample_summary: Homo sapiens C803
  • date_created: 2013-12-12T07:07:56.953236+00:00
  • date_released: 2012-08-28
  • doi: 10.17989/ENCSR000ELI
  • perturbed: False
  • reference_genome: hg38/genomes/GRCh38-hg38
  • replication_type: unreplicated
  • simple_biosample_summary:
  • status: released
  • submitter_comment:

Scores (1)

ID Type Default annotation Description Histogram Range Summary
DNase-seq_ENCSR000ELI float

DNase-seq_ENCSR000ELI

DNase-seq ENCSR000ELI [biosample_summary="Homo sapiens C803"]
HISTOGRAM FOR DNase-seq_ENCSR000ELI [0.0193, 120]
n
26,247,010
mean
2.55
sd
5.84

n counts base pairs; sd is the population standard deviation.

Coverage

Chromosome Covered positions Covered % Segments
all chromosomes 262470100.82% 151978
chr1 2462035 0.99% 14193
chr2 2048504 0.85% 11923
chr3 1559009 0.79% 9001
chr4 1147430 0.60% 6668
chr5 1371106 0.76% 7999
chr6 1467979 0.86% 8495
chr7 1299347 0.82% 7581
chr8 1166116 0.80% 6780
chr9 1165102 0.84% 6768
chr10 1264867 0.95% 7291
chr11 1406280 1.04% 8077
chr12 1273761 0.96% 7378
chr13 596604 0.52% 3514
chr14 830955 0.78% 4777
chr15 834590 0.82% 4813
chr16 949333 1.05% 5503
chr17 1270838 1.53% 7313
chr18 523777 0.65% 3058
chr19 1313734 2.24% 7494
chr20 722080 1.12% 4198
chr21 327027 0.70% 1894
chr22 579492 1.14% 3321
chrX 644808 0.41% 3801
chrY 22236 0.04% 138
3342 contigs with no values (129077085 bp) 0 0.00% 0

Segment lengths

segments min max mean median
segments 151978 4 860 172.7 160
global segment-length histogram

Files

Filename Size md5
ENCFF197UWV.bed.gz 1.64 MB abc0317ceaf794f98f215f66747974b1
ENCFF197UWV.tabix.bed.gz 1.5 MB 597c158d751fb669f264b1f44e6a8342
ENCFF197UWV.tabix.bed.gz.tbi 494.67 KB af489c7c775765e737b45d90d4fb9a96
genomic_resource.yaml 1.28 KB 46ba0f1f8265ce0d1bf4b1f2e406356e
statistics/