Resource

Id DNase-seq/ENCSR000ELGcontent_copy
Type position_score
Version 0
Summary DNase-seq ENCSR000ELG [biosample_summary="Homo sapiens naive B cell"]
Description
Labels
  • accession: ENCSR000ELG
  • assay_term_name: DNase-seq
  • biosample_ontology: /biosample-types/primary_cell_CL_0000788/
  • biosample_summary: Homo sapiens naive B cell
  • date_created: 2013-12-12T07:07:55.909319+00:00
  • date_released: 2012-08-28
  • doi: 10.17989/ENCSR000ELG
  • perturbed: False
  • reference_genome: hg38/genomes/GRCh38-hg38
  • replication_type: unreplicated
  • simple_biosample_summary:
  • status: released
  • submitter_comment:

Scores (1)

ID Type Default annotation Description Histogram Range Summary
DNase-seq_ENCSR000ELG float

DNase-seq_ENCSR000ELG

DNase-seq ENCSR000ELG [biosample_summary="Homo sapiens naive B cell"]
HISTOGRAM FOR DNase-seq_ENCSR000ELG [0.0338, 23.5]
n
16,714,299
mean
1.66
sd
2.13

n counts base pairs; sd is the population standard deviation.

Coverage

Chromosome Covered positions Covered % Segments
all chromosomes 167142990.52% 85955
chr1 1596082 0.64% 8164
chr2 1267810 0.52% 6514
chr3 1002812 0.51% 5134
chr4 690272 0.36% 3514
chr5 785644 0.43% 4037
chr6 1052022 0.62% 5337
chr7 781248 0.49% 4049
chr8 697541 0.48% 3626
chr9 660205 0.48% 3424
chr10 752174 0.56% 3901
chr11 867762 0.64% 4443
chr12 896525 0.67% 4573
chr13 351401 0.31% 1841
chr14 558052 0.52% 2861
chr15 543274 0.53% 2814
chr16 606968 0.67% 3124
chr17 863157 1.04% 4474
chr18 322701 0.40% 1626
chr19 868708 1.48% 4399
chr20 456168 0.71% 2371
chr21 193798 0.41% 1007
chr22 378766 0.75% 1961
chrX 501951 0.32% 2655
chrY 19258 0.03% 106
3342 contigs with no values (129077085 bp) 0 0.00% 0

Segment lengths

segments min max mean median
segments 85955 1 1000 194.45 180
global segment-length histogram

Files

Filename Size md5
ENCFF440AXZ.bed.gz 949.2 KB 84829ba9bc252bcb52556ca1c91f5c85
ENCFF440AXZ.tabix.bed.gz 874.73 KB f2bce5573cad3f36b7211bd60954168e
ENCFF440AXZ.tabix.bed.gz.tbi 323.74 KB 586a6364d92dcce396a56cc203e66880
genomic_resource.yaml 2.15 KB aa0f850c1b8dab7e09ad989c9698b171
statistics/