Resource

Id DNase-seq/ENCSR000EJOcontent_copy
Type position_score
Version 0
Summary DNase-seq ENCSR000EJO [biosample_summary="Homo sapiens H7"]
Description
Labels
  • accession: ENCSR000EJO
  • assay_term_name: DNase-seq
  • biosample_ontology: /biosample-types/cell_line_EFO_0005904/
  • biosample_summary: Homo sapiens H7
  • date_created: 2013-12-12T07:07:30.757545+00:00
  • date_released: 2012-03-28
  • doi: 10.17989/ENCSR000EJO
  • perturbed: False
  • reference_genome: hg38/genomes/GRCh38-hg38
  • replication_type: unreplicated
  • simple_biosample_summary:
  • status: released
  • submitter_comment:

Scores (1)

ID Type Default annotation Description Histogram Range Summary
DNase-seq_ENCSR000EJO float

DNase-seq_ENCSR000EJO
DNase-seq ENCSR000EJO [biosample_summary="Homo sapiens H7"]
 HISTOGRAM FOR DNase-seq_ENCSR000EJO [0.0216, 28.2]
n
52,309,457
mean
1.11
sd
1.65

n counts base pairs; sd is the population standard deviation.

Coverage

Chromosome Covered positions Covered % Segments
all chromosomes 523094571.63% 249275
chr1 4622059 1.86% 21781
chr2 3743294 1.55% 18372
chr3 2330740 1.18% 11729
chr4 1862517 0.98% 9190
chr5 2285167 1.26% 11270
chr6 2286537 1.34% 11456
chr7 2877565 1.81% 13508
chr8 1969368 1.36% 9693
chr9 2476596 1.79% 11601
chr10 2471547 1.85% 11842
chr11 3113668 2.30% 14359
chr12 2255860 1.69% 11011
chr13 1019707 0.89% 5133
chr14 1766947 1.65% 8273
chr15 1646757 1.61% 7970
chr16 2191211 2.43% 10315
chr17 3238169 3.89% 14886
chr18 845031 1.05% 4318
chr19 3542966 6.04% 15646
chr20 1684882 2.61% 7912
chr21 796049 1.70% 3647
chr22 1952131 3.84% 8733
chrX 1329383 0.85% 6619
chrY 1306 <0.01% 11
3342 contigs with no values (129077085 bp) 0 0.00% 0

Segment lengths

segments min max mean median
segments 249275 1 1540 209.85 186
global segment-length histogram

Files

Filename Size md5
ENCFF114QGN.bed.gz 2.54 MB 29752fcb372b09cda58bea6f60eb9f5c
ENCFF114QGN.tabix.bed.gz 2.41 MB f13963511571645217a9817cef5fa3db
ENCFF114QGN.tabix.bed.gz.tbi 529.3 KB 79f852bdd754c2726415861bb298ace3
genomic_resource.yaml 1.27 KB 8ddedaa6c85fe17d33b36d04c04eb2a2
statistics/