Resource

Id ATAC-seq/ENCSR925LGWcontent_copy
Type position_score
Version 0
Summary ATAC-seq ENCSR925LGW [biosample_summary="Homo sapiens heart left ventricle tissue female adult (59 years)"]
Description
Labels
  • accession: ENCSR925LGW
  • assay_term_name: ATAC-seq
  • biosample_ontology: /biosample-types/tissue_UBERON_0002084/
  • biosample_summary: Homo sapiens heart left ventricle tissue female adult (59 years)
  • date_created: 2019-06-02T03:50:58.797943+00:00
  • date_released: 2020-08-17
  • doi: 10.17989/ENCSR925LGW
  • perturbed: False
  • reference_genome: hg38/genomes/GRCh38-hg38
  • replication_type: unreplicated
  • simple_biosample_summary: female adult (59 years)
  • status: released
  • submitter_comment:

Scores (1)

ID Type Default annotation Description Histogram Range Summary
ATAC-seq_ENCSR925LGW float

ATAC-seq_ENCSR925LGW
ATAC-seq ENCSR925LGW [biosample_summary="Homo sapiens heart left ventricle tissue female adult (59 years)"]
 HISTOGRAM FOR ATAC-seq_ENCSR925LGW [1.3, 35.3]
n
85,449,202
mean
5.02
sd
2.42

n counts base pairs; sd is the population standard deviation.

Coverage

Chromosome Covered positions Covered % Segments
all chromosomes 854492022.66% 150368
chr1 8274977 3.32% 14322
chr2 6845964 2.83% 12328
chr3 5561985 2.80% 10163
chr4 3765868 1.98% 7031
chr5 4720801 2.60% 8642
chr6 4841048 2.83% 8831
chr7 4261494 2.67% 7645
chr8 3815661 2.63% 6994
chr9 3719098 2.69% 6472
chr10 4312372 3.22% 7837
chr11 4403796 3.26% 7530
chr12 4100784 3.08% 7153
chr13 2100163 1.84% 3927
chr14 2588761 2.42% 4467
chr15 3010100 2.95% 5267
chr16 2990896 3.31% 4881
chr17 3932056 4.72% 6368
chr18 1891615 2.35% 3539
chr19 3012388 5.14% 4453
chr20 2298744 3.57% 4011
chr21 1126332 2.41% 1908
chr22 1878587 3.70% 3071
chrX 1995187 1.28% 3526
chrY 525 <0.01% 2
3342 contigs with no values (129077085 bp) 0 0.00% 0

Segment lengths

segments min max mean median
segments 150368 150 3222 568.27 447
global segment-length histogram

Files

Filename Size md5
ENCFF070YZT.bed.gz 5.95 MB 73d3df3f6d8d66c9272cc4b652d0b4b6
ENCFF070YZT.tabix.bed.gz 1.64 MB e7b3badb462955ce4040289261397952
ENCFF070YZT.tabix.bed.gz.tbi 480.85 KB 1a4aea40430866030c29b5f3fabe6c5b
genomic_resource.yaml 1.65 KB 0951ae060da976b217300054fff6ec00
statistics/