Resource

Id ATAC-seq/ENCSR833ACPcontent_copy
Type position_score
Version 0
Summary ATAC-seq ENCSR833ACP [biosample_summary="Homo sapiens HG03103"]
Description
Labels
  • accession: ENCSR833ACP
  • assay_term_name: ATAC-seq
  • biosample_ontology: /biosample-types/cell_line_EFO_0010868/
  • biosample_summary: Homo sapiens HG03103
  • date_created: 2020-11-24T22:02:33.260962+00:00
  • date_released: 2021-02-11
  • doi: 10.17989/ENCSR833ACP
  • perturbed: False
  • reference_genome: hg38/genomes/GRCh38-hg38
  • replication_type: unreplicated
  • simple_biosample_summary:
  • status: released
  • submitter_comment:

Scores (1)

ID Type Default annotation Description Histogram Range Summary
ATAC-seq_ENCSR833ACP float

ATAC-seq_ENCSR833ACP
ATAC-seq ENCSR833ACP [biosample_summary="Homo sapiens HG03103"]
 HISTOGRAM FOR ATAC-seq_ENCSR833ACP [1.64, 38.6]
n
47,464,541
mean
7.88
sd
3.81

n counts base pairs; sd is the population standard deviation.

Coverage

Chromosome Covered positions Covered % Segments
all chromosomes 474645411.48% 92851
chr1 4209530 1.69% 8089
chr2 4208552 1.74% 8401
chr3 3431117 1.73% 6963
chr4 2776224 1.46% 5635
chr5 2951590 1.63% 5913
chr6 3179504 1.86% 6290
chr7 2679900 1.68% 5257
chr8 2453945 1.69% 4972
chr9 1872744 1.35% 3665
chr10 2360658 1.76% 4620
chr11 2291528 1.70% 4482
chr12 2376000 1.78% 4605
chr13 1283677 1.12% 2575
chr14 1409651 1.32% 2708
chr15 1306603 1.28% 2517
chr16 1322465 1.46% 2396
chr17 1472248 1.77% 2662
chr18 1102290 1.37% 2244
chr19 1185789 2.02% 1968
chr20 1015134 1.58% 1973
chr21 509414 1.09% 941
chr22 504165 0.99% 904
chrX 1470133 0.94% 2862
chrY 91680 0.16% 209
3342 contigs with no values (129077085 bp) 0 0.00% 0

Segment lengths

segments min max mean median
segments 92851 150 2834 511.19 432
global segment-length histogram

Files

Filename Size md5
ENCFF304LHI.bed.gz 3.46 MB 06115dd1060270e500eea08988653344
ENCFF304LHI.tabix.bed.gz 1.02 MB 5a4c2d1e70b7335b27ce8631d34b68ce
ENCFF304LHI.tabix.bed.gz.tbi 431.23 KB 6726a267053db76100ac4d130215dc4c
genomic_resource.yaml 1.66 KB 1ebe2e84dc2e411b3d6a347947bfbc37
statistics/