Resource

Id ATAC-seq/ENCSR774NXAcontent_copy
Type position_score
Version 0
Summary ATAC-seq ENCSR774NXA [biosample_summary="Homo sapiens psoas muscle tissue female adult (61 years)"]
Description
Labels
  • accession: ENCSR774NXA
  • assay_term_name: ATAC-seq
  • biosample_ontology: /biosample-types/tissue_UBERON_0008450/
  • biosample_summary: Homo sapiens psoas muscle tissue female adult (61 years)
  • date_created: 2019-06-02T13:09:27.332029+00:00
  • date_released: 2020-08-17
  • doi: 10.17989/ENCSR774NXA
  • perturbed: False
  • reference_genome: hg38/genomes/GRCh38-hg38
  • replication_type: unreplicated
  • simple_biosample_summary: female adult (61 years)
  • status: released
  • submitter_comment:

Scores (1)

ID Type Default annotation Description Histogram Range Summary
ATAC-seq_ENCSR774NXA float

ATAC-seq_ENCSR774NXA
ATAC-seq ENCSR774NXA [biosample_summary="Homo sapiens psoas muscle tissue female adult (61 years)"]
 HISTOGRAM FOR ATAC-seq_ENCSR774NXA [1.15, 30.2]
n
82,019,390
mean
5.28
sd
2.75

n counts base pairs; sd is the population standard deviation.

Coverage

Chromosome Covered positions Covered % Segments
all chromosomes 820193902.55% 133053
chr1 8095019 3.25% 12955
chr2 6748244 2.79% 11215
chr3 5460828 2.75% 9284
chr4 3209117 1.69% 5455
chr5 4226774 2.33% 7189
chr6 4792406 2.81% 8099
chr7 4190009 2.63% 6862
chr8 3304026 2.28% 5488
chr9 3580801 2.59% 5771
chr10 4233026 3.16% 7123
chr11 4118323 3.05% 6444
chr12 3739601 2.81% 6012
chr13 1820125 1.59% 3056
chr14 2643038 2.47% 4209
chr15 3035604 2.98% 4902
chr16 3076721 3.41% 4708
chr17 4122901 4.95% 6186
chr18 1617218 2.01% 2796
chr19 2887619 4.93% 3998
chr20 2185957 3.39% 3518
chr21 1006461 2.15% 1610
chr22 1945759 3.83% 2981
chrX 1979585 1.27% 3191
chrY 228 <0.01% 1
3342 contigs with no values (129077085 bp) 0 0.00% 0

Segment lengths

segments min max mean median
segments 133053 150 4275 616.44 476
global segment-length histogram

Files

Filename Size md5
ENCFF902MEH.bed.gz 6.02 MB 891b9c570d687017075fdd0ee6cfb54f
ENCFF902MEH.tabix.bed.gz 1.48 MB 6c2e897327cdd87cca1f1948615cb33e
ENCFF902MEH.tabix.bed.gz.tbi 409.71 KB f65dddc7bd981b9d2c22b0e6a7a90ebd
genomic_resource.yaml 1.42 KB b6c460917920870d6f5c772d6c196215
statistics/