type: position_score
table:
  filename: ENCFF182JHG.tabix.bed.gz
  header_mode: none
  zero_based: true
  format: tabix
  chrom:
    column_index: 0
  pos_begin:
    column_index: 1
  pos_end:
    column_index: 2
scores:
- id: ATAC-seq_ENCSR653VSR
  column_index: 3
  type: float
  desc: signal
  histogram:
    type: number
    number_of_bins: 100
meta:
  summary: "ATAC-seq ENCSR653VSR [TISSUE: Homo sapiens stimulated activated naive\
    \ B cell female adult (39 years) treated with 1 \u03BCg/mL anti-CD40 for 72 hours,\
    \ 10 \u03BCg/mL anti-IgM for 72 hours, 100 ng/mL Interleukin-4 for 72 hours]"
  description: "**status**: released\n\n**biological\\_replicates**: Rep 1, Rep 2\n\
    \n**summary**: female adult (39 years) treated with 1 \u03BCg/mL anti-CD40 for\
    \ 72 hours, 10 \u03BCg/mL anti-IgM for 72 hours, 100 ng/mL Interleukin-4 for 72\
    \ hours\n\n**output\\_type**: replicated peaks\n\n**audit\\_internal\\_action**:\
    \ Released analysis {ENCAN697RWU|/analyses/ENCAN697RWU/} has in progress subobject\
    \ quality standard {encode4-atac-seq|/quality-standards/encode4-atac-seq/}\n\n\
    **audit\\_warning**: NRF (Non Redundant Fraction) is equal to the result of the\
    \ division of the number of reads after duplicates removal by the total number\
    \ of reads. An NRF value < 0.7 is poor complexity, between 0.7 and 0.9 is moderate\
    \ complexity, and >= 0.9 high complexity. NRF value > 0.9 is recommended, but\
    \ > 0.7 is acceptable. ENCODE processed file {ENCFF070YLW|/files/ENCFF070YLW/}\
    \ processed by ATAC-seq ENCODE4 v1.10.0 GRCh38 pipeline was generated from a library\
    \ with NRF value of 0.89499.\n\n**audit\\_warning**: NRF (Non Redundant Fraction)\
    \ is equal to the result of the division of the number of reads after duplicates\
    \ removal by the total number of reads. An NRF value < 0.7 is poor complexity,\
    \ between 0.7 and 0.9 is moderate complexity, and >= 0.9 high complexity. NRF\
    \ value > 0.9 is recommended, but > 0.7 is acceptable. ENCODE processed file {ENCFF990FRL|/files/ENCFF990FRL/}\
    \ processed by ATAC-seq ENCODE4 v1.10.0 GRCh38 pipeline was generated from a library\
    \ with NRF value of 0.889588."
  labels:
    reference_genome: hg38/genomes/GRCh38-hg38
    accession: ENCSR653VSR
    status: released
    assay_term_name: ATAC-seq
    simple_biosample_summary: "female adult (39 years) treated with 1 \u03BCg/mL anti-CD40\
      \ for 72 hours, 10 \u03BCg/mL anti-IgM for 72 hours, 100 ng/mL Interleukin-4\
      \ for 72 hours"
    biosample_summary: "Homo sapiens stimulated activated naive B cell female adult\
      \ (39 years) treated with 1 \u03BCg/mL anti-CD40 for 72 hours, 10 \u03BCg/mL\
      \ anti-IgM for 72 hours, 100 ng/mL Interleukin-4 for 72 hours"
    replication_type: isogenic
    biosample_ontology: /biosample-types/primary_cell_NTR_0000661/
    perturbed: false
    doi: 10.17989/ENCSR653VSR
    date_created: '2021-08-25T22:28:41.485266+00:00'
    date_released: '2021-09-09'
    submitter_comment: ''