Resource

Id ATAC-seq/ENCSR615YILcontent_copy
Type position_score
Version 0
Summary ATAC-seq ENCSR615YIL [biosample_summary="Homo sapiens HG03139"]
Description
Labels
  • accession: ENCSR615YIL
  • assay_term_name: ATAC-seq
  • biosample_ontology: /biosample-types/cell_line_EFO_0010871/
  • biosample_summary: Homo sapiens HG03139
  • date_created: 2020-11-24T22:02:33.650898+00:00
  • date_released: 2021-02-11
  • doi: 10.17989/ENCSR615YIL
  • perturbed: False
  • reference_genome: hg38/genomes/GRCh38-hg38
  • replication_type: unreplicated
  • simple_biosample_summary:
  • status: released
  • submitter_comment:

Scores (1)

ID Type Default annotation Description Histogram Range Summary
ATAC-seq_ENCSR615YIL float

ATAC-seq_ENCSR615YIL
ATAC-seq ENCSR615YIL [biosample_summary="Homo sapiens HG03139"]
 HISTOGRAM FOR ATAC-seq_ENCSR615YIL [1.55, 30.2]
n
45,759,371
mean
7.18
sd
3.42

n counts base pairs; sd is the population standard deviation.

Coverage

Chromosome Covered positions Covered % Segments
all chromosomes 457593711.42% 88810
chr1 4160184 1.67% 7991
chr2 3948096 1.63% 7937
chr3 3168413 1.60% 6348
chr4 2617992 1.38% 5343
chr5 2771758 1.53% 5532
chr6 3056279 1.79% 6001
chr7 2502699 1.57% 4937
chr8 2269928 1.56% 4578
chr9 1838600 1.33% 3553
chr10 2225769 1.66% 4356
chr11 2231856 1.65% 4316
chr12 2271194 1.70% 4361
chr13 1232317 1.08% 2478
chr14 1410801 1.32% 2667
chr15 1342576 1.32% 2541
chr16 1316766 1.46% 2344
chr17 1600005 1.92% 2875
chr18 1020445 1.27% 2073
chr19 1319815 2.25% 2116
chr20 989397 1.54% 1890
chr21 427397 0.92% 761
chr22 594888 1.17% 1035
chrX 1357998 0.87% 2602
chrY 84198 0.15% 175
3342 contigs with no values (129077085 bp) 0 0.00% 0

Segment lengths

segments min max mean median
segments 88810 150 2656 515.25 428
global segment-length histogram

Files

Filename Size md5
ENCFF045HAH.bed.gz 3.32 MB f859f36c301f32a5224d599b4bcd3a89
ENCFF045HAH.tabix.bed.gz 998.9 KB 941d47a2beec3c6dbc78ba118d61749e
ENCFF045HAH.tabix.bed.gz.tbi 415.01 KB b7bfc6dcd6584b11e5045e3b7c8cf3c9
genomic_resource.yaml 1.28 KB b8c823767485d61b2cdb984ae5801b01
statistics/