Resource

Id ATAC-seq/ENCSR522FGIcontent_copy
Type position_score
Version 0
Summary ATAC-seq ENCSR522FGI [biosample_summary="Homo sapiens heart right ventricle tissue male adult (43 years)"]
Description
Labels
  • accession: ENCSR522FGI
  • assay_term_name: ATAC-seq
  • biosample_ontology: /biosample-types/tissue_UBERON_0002080/
  • biosample_summary: Homo sapiens heart right ventricle tissue male adult (43 years)
  • date_created: 2019-07-30T07:40:20.321381+00:00
  • date_released: 2020-08-17
  • doi: 10.17989/ENCSR522FGI
  • perturbed: False
  • reference_genome: hg38/genomes/GRCh38-hg38
  • replication_type: unreplicated
  • simple_biosample_summary: male adult (43 years)
  • status: released
  • submitter_comment:

Scores (1)

ID Type Default annotation Description Histogram Range Summary
ATAC-seq_ENCSR522FGI float

ATAC-seq_ENCSR522FGI
ATAC-seq ENCSR522FGI [biosample_summary="Homo sapiens heart right ventricle tissue male adult (43 years)"]
 HISTOGRAM FOR ATAC-seq_ENCSR522FGI [1.31, 26.7]
n
72,044,459
mean
4.95
sd
2.23

n counts base pairs; sd is the population standard deviation.

Coverage

Chromosome Covered positions Covered % Segments
all chromosomes 720444592.24% 123640
chr1 7087223 2.85% 12062
chr2 5699457 2.35% 10007
chr3 4581175 2.31% 8073
chr4 3022666 1.59% 5434
chr5 3832819 2.11% 6772
chr6 4047140 2.37% 7119
chr7 3560395 2.23% 6212
chr8 3201275 2.21% 5668
chr9 3102846 2.24% 5271
chr10 3693371 2.76% 6468
chr11 3777493 2.80% 6314
chr12 3504553 2.63% 5909
chr13 1766266 1.54% 3186
chr14 2218422 2.07% 3774
chr15 2558115 2.51% 4394
chr16 2586610 2.86% 4285
chr17 3517126 4.22% 5668
chr18 1551514 1.93% 2865
chr19 2657165 4.53% 3933
chr20 1974489 3.06% 3391
chr21 897924 1.92% 1522
chr22 1631502 3.21% 2710
chrX 1501495 0.96% 2456
chrY 73418 0.13% 147
3342 contigs with no values (129077085 bp) 0 0.00% 0

Segment lengths

segments min max mean median
segments 123640 150 3078 582.7 464
global segment-length histogram

Files

Filename Size md5
ENCFF235AYD.bed.gz 5.31 MB bc1db6d775fcee5dfc0e5c0b17e8b1de
ENCFF235AYD.tabix.bed.gz 1.37 MB 39043737960ee90b38f62faceb8422e9
ENCFF235AYD.tabix.bed.gz.tbi 427.09 KB 21bfc8a58cb88164f7a642d0bd1003b3
genomic_resource.yaml 1.65 KB e4d959c1d09076decef06dcdd8030dc3
statistics/