Resource

Id ATAC-seq/ENCSR439TZTcontent_copy
Type position_score
Version 0
Summary ATAC-seq ENCSR439TZT [biosample_summary="Homo sapiens heart right ventricle tissue male adult (66 years)"]
Description
Labels
  • accession: ENCSR439TZT
  • assay_term_name: ATAC-seq
  • biosample_ontology: /biosample-types/tissue_UBERON_0002080/
  • biosample_summary: Homo sapiens heart right ventricle tissue male adult (66 years)
  • date_created: 2019-07-30T07:47:44.853226+00:00
  • date_released: 2020-10-08
  • doi: 10.17989/ENCSR439TZT
  • perturbed: False
  • reference_genome: hg38/genomes/GRCh38-hg38
  • replication_type: unreplicated
  • simple_biosample_summary: male adult (66 years)
  • status: released
  • submitter_comment:

Scores (1)

ID Type Default annotation Description Histogram Range Summary
ATAC-seq_ENCSR439TZT float

ATAC-seq_ENCSR439TZT
ATAC-seq ENCSR439TZT [biosample_summary="Homo sapiens heart right ventricle tissue male adult (66 years)"]
 HISTOGRAM FOR ATAC-seq_ENCSR439TZT [1.36, 33.2]
n
66,353,331
mean
4.83
sd
2.35

n counts base pairs; sd is the population standard deviation.

Coverage

Chromosome Covered positions Covered % Segments
all chromosomes 663533312.06% 118836
chr1 6423434 2.58% 11335
chr2 5304645 2.19% 9739
chr3 4231587 2.13% 7699
chr4 2791008 1.47% 5211
chr5 3512873 1.94% 6436
chr6 3810132 2.23% 6978
chr7 3279662 2.06% 6016
chr8 2898316 2.00% 5286
chr9 2876511 2.08% 5095
chr10 3379532 2.53% 6171
chr11 3432483 2.54% 6110
chr12 3244247 2.43% 5780
chr13 1649558 1.44% 3036
chr14 2023886 1.89% 3570
chr15 2363063 2.32% 4198
chr16 2381829 2.64% 4170
chr17 3199840 3.84% 5395
chr18 1422408 1.77% 2662
chr19 2501918 4.27% 3974
chr20 1828252 2.84% 3330
chr21 883704 1.89% 1573
chr22 1495894 2.94% 2609
chrX 1362080 0.87% 2349
chrY 56469 0.10% 114
3342 contigs with no values (129077085 bp) 0 0.00% 0

Segment lengths

segments min max mean median
segments 118836 150 3056 558.36 453
global segment-length histogram

Files

Filename Size md5
ENCFF367NDF.bed.gz 4.91 MB 92afc0d8ef4b068ea669e5254e2bd2f1
ENCFF367NDF.tabix.bed.gz 1.31 MB 87e9e929866157ecfa32b0bf5d2cb787
ENCFF367NDF.tabix.bed.gz.tbi 431.89 KB b0ab1fed81a00e96d06187e711f7dcb5
genomic_resource.yaml 1.65 KB 03897fad4a69cb82f208fe6fa910cd16
statistics/