Resource

Id ATAC-seq/ENCSR437OOJcontent_copy
Type position_score
Version 0
Summary ATAC-seq ENCSR437OOJ [biosample_summary="Homo sapiens heart right ventricle tissue female adult (59 years)"]
Description
Labels
  • accession: ENCSR437OOJ
  • assay_term_name: ATAC-seq
  • biosample_ontology: /biosample-types/tissue_UBERON_0002080/
  • biosample_summary: Homo sapiens heart right ventricle tissue female adult (59 years)
  • date_created: 2019-06-02T04:08:47.709267+00:00
  • date_released: 2020-08-17
  • doi: 10.17989/ENCSR437OOJ
  • perturbed: False
  • reference_genome: hg38/genomes/GRCh38-hg38
  • replication_type: unreplicated
  • simple_biosample_summary: female adult (59 years)
  • status: released
  • submitter_comment:

Scores (1)

ID Type Default annotation Description Histogram Range Summary
ATAC-seq_ENCSR437OOJ float

ATAC-seq_ENCSR437OOJ
ATAC-seq ENCSR437OOJ [biosample_summary="Homo sapiens heart right ventricle tissue female adult (59 years)"]
 HISTOGRAM FOR ATAC-seq_ENCSR437OOJ [1.27, 35]
n
77,241,450
mean
5.33
sd
2.77

n counts base pairs; sd is the population standard deviation.

Coverage

Chromosome Covered positions Covered % Segments
all chromosomes 772414502.40% 132832
chr1 7480882 3.00% 12700
chr2 6173574 2.55% 10834
chr3 4872757 2.46% 8641
chr4 3235945 1.70% 5819
chr5 4122612 2.27% 7350
chr6 4261482 2.49% 7466
chr7 3875149 2.43% 6768
chr8 3377684 2.33% 6033
chr9 3382036 2.44% 5825
chr10 3947245 2.95% 6945
chr11 4019269 2.98% 6803
chr12 3703902 2.78% 6350
chr13 1837448 1.61% 3291
chr14 2367358 2.21% 4048
chr15 2725411 2.67% 4680
chr16 2847167 3.15% 4672
chr17 3724671 4.47% 5955
chr18 1666791 2.07% 3029
chr19 2916168 4.97% 4314
chr20 2169186 3.37% 3728
chr21 1020947 2.19% 1722
chr22 1777023 3.50% 2904
chrX 1736210 1.11% 2953
chrY 533 <0.01% 2
3342 contigs with no values (129077085 bp) 0 0.00% 0

Segment lengths

segments min max mean median
segments 132832 150 3224 581.5 477
global segment-length histogram

Files

Filename Size md5
ENCFF800VLU.bed.gz 5.19 MB 73bea05312e8c0769850931150f66ea7
ENCFF800VLU.tabix.bed.gz 1.46 MB b6e75614dae6a7cf24548e105266a498
ENCFF800VLU.tabix.bed.gz.tbi 467.25 KB 81e483c829584630663900dd6fe8dc00
genomic_resource.yaml 1.66 KB a73b80cb0ce28b82720d477cb18d3ee3
statistics/