type: position_score
table:
  filename: ENCFF589OTG.tabix.bed.gz
  header_mode: none
  zero_based: true
  format: tabix
  chrom:
    column_index: 0
  pos_begin:
    column_index: 1
  pos_end:
    column_index: 2
scores:
- id: ATAC-seq_ENCSR409YCK
  column_index: 3
  type: float
  desc: 'ATAC-seq ENCSR409YCK [biosample_summary="Homo sapiens GM19043"]'
  histogram:
    type: number
    number_of_bins: 100
meta:
  summary: 'ATAC-seq ENCSR409YCK [biosample_summary="Homo sapiens GM19043"]'
  description: "**status**: released\n\n**biological\\_replicates**: Rep 1\n\n**summary**:\
    \ \n\n**output\\_type**: pseudoreplicated peaks\n\n**audit\\_internal\\_action**:\
    \ Released analysis {ENCAN094EVN|/analyses/ENCAN094EVN/} has in progress subobject\
    \ quality standard {encode4-atac-seq|/quality-standards/encode4-atac-seq/}\n\n\
    **audit\\_warning**: Alignment file {ENCFF795UPB|/files/ENCFF795UPB/} processed\
    \ by ATAC-seq ENCODE4 v1.9.1 GRCh38 pipeline has 21095325 usable fragments. According\
    \ to ENCODE4 standards, ATAC-seq assays processed by the uniform processing pipeline\
    \ should have > 25 million usable fragments. 20-25 million is acceptable and <\
    \ 15 million is not compliant."
  labels:
    reference_genome: hg38/genomes/GRCh38-hg38
    accession: ENCSR409YCK
    status: released
    assay_term_name: ATAC-seq
    simple_biosample_summary: ''
    biosample_summary: Homo sapiens GM19043
    replication_type: unreplicated
    biosample_ontology: /biosample-types/cell_line_EFO_0010837/
    perturbed: false
    doi: 10.17989/ENCSR409YCK
    date_created: '2020-11-24T22:02:37.597231+00:00'
    date_released: '2021-02-11'
    submitter_comment: ''