Resource

Id	ATAC-seq/ENCSR200OMLcontent_copy
Type	position_score
Version	0
Summary	ATAC-seq ENCSR200OML [biosample_summary="Homo sapiens IMR-90 nuclear fraction and unspecified fraction"]
Description
Labels	accession: ENCSR200OML assay_term_name: ATAC-seq biosample_ontology: /biosample-types/cell_line_EFO_0001196/ biosample_summary: Homo sapiens IMR-90 nuclear fraction and unspecified fraction date_created: 2020-05-18T11:51:23.427285+00:00 date_released: 2020-08-05 doi: 10.17989/ENCSR200OML perturbed: False reference_genome: hg38/genomes/GRCh38-hg38 replication_type: isogenic simple_biosample_summary: nuclear fraction status: released submitter_comment:

Scores (1)

ID	Type	Default annotation	Description	Histogram	Range	Summary
ATAC-seq_ENCSR200OML	float	ATAC-seq_ENCSR200OML	ATAC-seq ENCSR200OML [biosample_summary="Homo sapiens IMR-90 nuclear fraction and unspecified fraction"]		[1.39, 37.8]	n 100,045,437 mean 6.77 sd 3.06

n counts base pairs; sd is the population standard deviation.

Chromosome	Covered positions	Covered %	Segments
all chromosomes	100045437	3.11%	150006
chr1	9562306	3.84%	14317
chr2	8453004	3.49%	12866
chr3	6562846	3.31%	10046
chr4	5079080	2.67%	7917
chr5	5642874	3.11%	8700
chr6	6086553	3.56%	9264
chr7	5130025	3.22%	7736
chr8	4585266	3.16%	7024
chr9	4390461	3.17%	6526
chr10	4849596	3.62%	7296
chr11	5264575	3.90%	7725
chr12	4823715	3.62%	7231
chr13	2695278	2.36%	4176
chr14	3126474	2.92%	4702
chr15	3405599	3.34%	5080
chr16	3141148	3.48%	4417
chr17	4319158	5.19%	6090
chr18	2227609	2.77%	3442
chr19	2936163	5.01%	3929
chr20	2446215	3.80%	3663
chr21	1219412	2.61%	1792
chr22	1825794	3.59%	2597
chrX	2271828	1.46%	3468
chrY	458	<0.01%	2
3342 contigs with no values (129077085 bp)	0	0.00%	0

	segments	min	max	mean	median
segments	150006	150	3187	666.94	601