Resource
| Id | ATAC-seq/ENCSR154UWN |
|---|---|
| Type | position_score |
| Version | 0 |
| Summary | ATAC-seq ENCSR154UWN [biosample_summary="Homo sapiens psoas muscle tissue female child (16 years)"] |
| Description |
status: released biological_replicates: Rep 1 summary: female child (16 years) output_type: pseudoreplicated peaks audit_internal_action: Released analysis {ENCAN998SDL|/analyses/ENCAN998SDL/} has in progress subobject quality standard {encode4-atac-seq|/quality-standards/encode4-atac-seq/} |
| Labels |
|
Scores (1)
| ID | Type | Default annotation | Description | Histogram | Range | Summary |
|---|---|---|---|---|---|---|
| ATAC-seq_ENCSR154UWN | float |
ATAC-seq_ENCSR154UWN |
ATAC-seq ENCSR154UWN [biosample_summary="Homo sapiens psoas muscle tissue female child (16 years)"]
|
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[1.37, 35.8] |
|
n counts base pairs; sd is the population standard deviation.
Coverage
| Chromosome | Covered positions | Covered % | Segments |
|---|---|---|---|
| all chromosomes | 42890600 | 1.33% | 86624 |
| chr1 | 4308589 | 1.73% | 8584 |
| chr2 | 3484846 | 1.44% | 7217 |
| chr3 | 2769761 | 1.40% | 5750 |
| chr4 | 1706918 | 0.90% | 3637 |
| chr5 | 2138439 | 1.18% | 4438 |
| chr6 | 2484224 | 1.45% | 5153 |
| chr7 | 2145519 | 1.35% | 4463 |
| chr8 | 1752358 | 1.21% | 3666 |
| chr9 | 1873854 | 1.35% | 3774 |
| chr10 | 2139853 | 1.60% | 4454 |
| chr11 | 2227925 | 1.65% | 4419 |
| chr12 | 1990927 | 1.49% | 3954 |
| chr13 | 940326 | 0.82% | 1940 |
| chr14 | 1351518 | 1.26% | 2684 |
| chr15 | 1550274 | 1.52% | 3151 |
| chr16 | 1599611 | 1.77% | 3066 |
| chr17 | 2174388 | 2.61% | 4140 |
| chr18 | 834724 | 1.04% | 1793 |
| chr19 | 1712980 | 2.92% | 2990 |
| chr20 | 1138359 | 1.77% | 2317 |
| chr21 | 549324 | 1.18% | 1088 |
| chr22 | 1029183 | 2.03% | 1970 |
| chrX | 985801 | 0.63% | 1972 |
| chrY | 899 | <0.01% | 4 |
| 3342 contigs with no values (129077085 bp) | 0 | 0.00% | 0 |
Segment lengths
| segments | min | max | mean | median | |
|---|---|---|---|---|---|
| segments | 86624 | 150 | 2603 | 495.14 | 393 |
Files
| Filename | Size | md5 |
|---|---|---|
| ENCFF616OVJ.bed.gz | 3.2 MB | 5acecb3a87309bb42349cab9fc84fa9f |
| ENCFF616OVJ.tabix.bed.gz | 971.82 KB | 809a2d3d963e5916600c6b8a1e0b4605 |
| ENCFF616OVJ.tabix.bed.gz.tbi | 377.1 KB | 128d295b070b6949c175261631aab097 |
| genomic_resource.yaml | 1.42 KB | 4bc023adc304466eef31ee967d511a7a |
| statistics/ |
