Resource

Id ATAC-seq/ENCSR133WJYcontent_copy
Type position_score
Version 0
Summary ATAC-seq ENCSR133WJY [biosample_summary="Homo sapiens left ventricle myocardium superior tissue male adult (60 years)"]
Description
Labels
  • accession: ENCSR133WJY
  • assay_term_name: ATAC-seq
  • biosample_ontology: /biosample-types/tissue_NTR_0000494/
  • biosample_summary: Homo sapiens left ventricle myocardium superior tissue male adult (60 years)
  • date_created: 2019-06-02T09:09:42.389558+00:00
  • date_released: 2020-09-03
  • doi: 10.17989/ENCSR133WJY
  • perturbed: False
  • reference_genome: hg38/genomes/GRCh38-hg38
  • replication_type: unreplicated
  • simple_biosample_summary: male adult (60 years)
  • status: released
  • submitter_comment:

Scores (1)

ID Type Default annotation Description Histogram Range Summary
ATAC-seq_ENCSR133WJY float

ATAC-seq_ENCSR133WJY
ATAC-seq ENCSR133WJY [biosample_summary="Homo sapiens left ventricle myocardium superior tissue male adult (60 years)"]
 HISTOGRAM FOR ATAC-seq_ENCSR133WJY [1.32, 34.7]
n
103,676,350
mean
5.55
sd
2.89

n counts base pairs; sd is the population standard deviation.

Coverage

Chromosome Covered positions Covered % Segments
all chromosomes 1036763503.22% 170457
chr1 10260527 4.12% 16568
chr2 8412571 3.47% 14098
chr3 6872471 3.47% 11664
chr4 4446100 2.34% 7742
chr5 5695627 3.14% 9661
chr6 5906222 3.46% 10104
chr7 5222606 3.28% 8707
chr8 4671778 3.22% 7985
chr9 4462383 3.22% 7202
chr10 5342010 3.99% 9003
chr11 5352225 3.96% 8532
chr12 4911279 3.69% 8072
chr13 2563223 2.24% 4500
chr14 3126132 2.92% 5093
chr15 3771678 3.70% 6118
chr16 3582593 3.97% 5465
chr17 4631614 5.56% 6968
chr18 2291122 2.85% 4088
chr19 3435452 5.86% 4759
chr20 2782574 4.32% 4501
chr21 1323049 2.83% 2114
chr22 2292854 4.51% 3437
chrX 2182205 1.40% 3787
chrY 138055 0.24% 289
3342 contigs with no values (129077085 bp) 0 0.00% 0

Segment lengths

segments min max mean median
segments 170457 150 3761 608.23 484
global segment-length histogram

Files

Filename Size md5
ENCFF265PLB.bed.gz 6.71 MB 7a2be7384f8c496a4479c363b3480ada
ENCFF265PLB.tabix.bed.gz 1.87 MB b853eaf8a5b3ed5c261abc9f8955e628
ENCFF265PLB.tabix.bed.gz.tbi 494.61 KB 2cd75e9bfc7b261ca79a108350695f23
genomic_resource.yaml 1.69 KB e8a9e261d8600cb652d8ea6952620808
statistics/