Resource

Id ATAC-seq/ENCSR063UNGcontent_copy
Type position_score
Version 0
Summary ATAC-seq ENCSR063UNG [biosample_summary="Homo sapiens HG03196"]
Description
Labels
  • accession: ENCSR063UNG
  • assay_term_name: ATAC-seq
  • biosample_ontology: /biosample-types/cell_line_EFO_0010874/
  • biosample_summary: Homo sapiens HG03196
  • date_created: 2020-11-24T22:02:34.057190+00:00
  • date_released: 2021-02-11
  • doi: 10.17989/ENCSR063UNG
  • perturbed: False
  • reference_genome: hg38/genomes/GRCh38-hg38
  • replication_type: unreplicated
  • simple_biosample_summary:
  • status: released
  • submitter_comment:

Scores (1)

ID Type Default annotation Description Histogram Range Summary
ATAC-seq_ENCSR063UNG float

ATAC-seq_ENCSR063UNG
ATAC-seq ENCSR063UNG [biosample_summary="Homo sapiens HG03196"]
 HISTOGRAM FOR ATAC-seq_ENCSR063UNG [1.47, 30.9]
n
47,532,465
mean
5.96
sd
2.76

n counts base pairs; sd is the population standard deviation.

Coverage

Chromosome Covered positions Covered % Segments
all chromosomes 475324651.48% 89966
chr1 4374729 1.76% 8157
chr2 3997172 1.65% 7827
chr3 3263944 1.65% 6355
chr4 2649101 1.39% 5255
chr5 2799481 1.54% 5470
chr6 3193248 1.87% 6135
chr7 2557864 1.61% 4958
chr8 2303961 1.59% 4531
chr9 1907111 1.38% 3652
chr10 2301188 1.72% 4408
chr11 2280857 1.69% 4259
chr12 2362215 1.77% 4436
chr13 1260336 1.10% 2447
chr14 1504742 1.41% 2789
chr15 1403724 1.38% 2614
chr16 1423692 1.58% 2477
chr17 1830155 2.20% 3169
chr18 1045407 1.30% 2066
chr19 1453143 2.48% 2280
chr20 1045169 1.62% 1992
chr21 477281 1.02% 854
chr22 693060 1.36% 1194
chrX 1318205 0.84% 2463
chrY 86680 0.15% 178
3342 contigs with no values (129077085 bp) 0 0.00% 0

Segment lengths

segments min max mean median
segments 89966 150 3114 528.34 429
global segment-length histogram

Files

Filename Size md5
ENCFF757TJE.bed.gz 3.48 MB 9b1d2f1251b80e5ff0e813778633da6c
ENCFF757TJE.tabix.bed.gz 1015.63 KB 09fee0bd53110ac643d8f87c1d0382b6
ENCFF757TJE.tabix.bed.gz.tbi 404.16 KB 6ceca4f7b9f341cc26ff12b04479dfb9
genomic_resource.yaml 1.28 KB 9d386d09a51834834727d3f16a8e1075
statistics/